Detail



ID : Ahg491725

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|491725|fgenesh2_kg.7__1158__AT4G30260.1
Sequence
TCTTCTTCAT CAGATCTGAA TCTAATTTCG CCCAAATCAA AGCTTTTGAC CTAAATCGTT TCCCGGGAAA AATCAACAAA CCATCACCGG AATCTCCAAT TTCTCTCCGG TGAAGAAAAA TGTCGCACAA CGATACGATT CCGCTTTATC AATCATCTCA ATCAGACATC GACGAGATTG AGAATATGAT GAACGATAGT TTCCAATCAG GTCCCGGAAC CGTTCTTCCA GCTCGACCAC CGAGTCCGAT CCGTCCGTCA ATTCCCGTTT CATCCTCACC GTTCGTTCAA TCCAATCTCC CACCGCTACC ACCGTCGTCT TCTTCCTCTC AGAAGGTGAT GCCTGTTCCA GCTCCTCCAC CGCTCCCGTC GGTAGGTAAC TCCAACAGCT CCGATGGTAA CAAGAGCATT GGAGGGAGTG GATTCGGATC TCCGCCAAAT ACATTGACGG AGCCTGTATG GGATACTGTG AAGCGCGATC TGTCACGGAT CGTGAGTAAT TTGAAGCTTG TGGTGTTTCC GAATCCGTAT AGGGAAGATC CTGGGAAAGC ACTTAGGGAT TGGGATCTAT GGGGACCGTT TTTCTTCATT GTGTTCTTGG GGCTTACTCT TTCGTGGTCT GCTTCTGTTA AGAAGTCTGA AGTATTTGCC GTGGCATTTG CACTACTTGC AGCTGGGGCA GTTATCCTCA CACTAAATGT GCTGCTTCTG GGAGGACATA TAATCTTTTT CCAAAGCCTA AGCCTTCTAG GTTACTGTCT ATTTCCACTG GACGTTGGAG CAGTGATCTG CATGTTGAAG GACAATGTGA TACTCAAAAT GATCGTTGTG TCTGTGACTC TTGCCTGGAG CTCTTGGGCT GCTTATCCTT TCATGAGTGC TGCAGTGAAC CCGAGAAGAA AAGCTCTAGC ACTTTACCCG GTTTTCCTCA TGTATGTCTC TGTTGGCTTC TTGATCATTG CCATTGATTG ATTCTATCTG GAAAAATGGG AAATCAGAGA TAGTTTCTCT GATTCAGTTT GGGAAATCAT TTGGTACAGA GTAGATAGAG AATTCTCCAG CCGTGAACTA TTCTGAGTTC TAAAGATCAT ATGTATAATA TGTTCTTCGA CGCTTTTTTG TTAAACTCTA TGGTTTTGCT TTATGTGTAT GAAACTTACG GTTCTTTTTG GAAACGTATA CAGTATATAA TATTAAAACC TTGATGATCG TAGCTTTAAT 
Length1220
Protein Sequence
Protein Residue
Map Locationscaffold_7: 4551517.. 4553765
Download Sequence
A.thaliana
AGI-codeAT4G30260.1
DescriptionIntegral membrane Yip1 family protein
TAIR curator summary
Alias[YIP4b][YPT/RAB GTPase Interacting Protein 4b]
Gene coexpression
MR
MR Locus Description
4 Ahg482309 AT hook motif DNA-binding family protein
7.07107 Ahg892706 actin binding
7.93725 Ahg931513 Basic-leucine zipper (bZIP) transcription factor family protein
15.906 Ahg478832 sequence-specific DNA binding transcription factors
17.3205 Ahg941351 apyrase 2
20.567 Ahg497146 Endomembrane protein 70 protein family
21.9773 Ahg488863 staurosporin and temperature sensitive 3-like A
22.7156 Ahg493917 succinate dehydrogenase 2-2
28.6182 Ahg919597 fatty acyl-ACP thioesterases B
29.1719 Ahg940194 TUDOR-SN protein 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression