Detail



ID : Ahg491849

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|491849|fgenesh2_kg.7__1282__AT4G29080.1
Sequence
TTTTTTGTTT CTCATTTCTC TCAGAAAGTG TTTTTTGTAA TCACTAAATG CTTCAAAAGT TTGTCCACAA TTATATTTTG AAAAATGTCT GAATCTGTAG CAGCAGAGCA TAATTACATA GGTTTGTCAG AGTTTCCAAC CATGGAAGAA GCAACAACAA TGTCTGACAA AACCAAAACC AGAGACAATA ACAACGGTCT CAATTTCAAG GCTACCGAGT TGAGGCTCGG TTTACCTGGT TCTGAGTCAC CGGACCGAGT CGACTCAAGA TTCTTGGCTC TCAACAAGAG TAGCTGTCCC GTGTCAGGTG CCAAAAGGGT GTTCTCCGAC GCCATTAACG AGTCTAACAA ATGGATCTTC TCTACCGGAT CCACTACTGC TACTGGTGAT GTCGGGTCGG GTTCTGGTCC CGGTAGCTCC GTCGTAAAAG ATGGAAAGTC GACAACTTTC CCTAAACCGG CTGTTCCGGT TAAGGAGAAG AAGAGCTCTG CAACAGCTCC AGCTTCAAAA GCACAAGTGG TGGGTTGGCC ACCAATAAGA TCATTCAGGA AGAACTCAAT GGCTTCTTCT CAATCTCAGA AACCAGGTAA TAACTCAGAG ACTGAAGAAG CAGAAGCCAA GTCTGGACCA GAACAACCTT GCTTGTATGT CAAAGTTAGT ATGGAAGGTG CTCCTTACTT GAGGAAAATC GATCTCAAGA CTTACAAAAG CTACCTTGAG CTCTCTTCTG CTCTTGAGAA GATGTTCAGT TGCTTCACCA TTGGTCAGTT TGGGTCTCAT GGAGGGTGTG GGAGAGATGG GTTAAACGAG AGTCGCTTGA CTGATCTCTT GCGTGGTTCT GAGTATGTTG TTACCTATGA AGATAAAGAC AGTGACTGGA TGCTCGTCGG AGATGTCCCT TGGGAAATGT TTATATGCTC CTGCAAGAAG CTGAGAATCA TGAAGAGCTC TGAGGCTATC GGCTTAGCTC CAAGGGTGAT GGAAAAGTGC AGAAGCAGGA ACTAGGAAAA GCCCTTTTAT GTGATAATAT ATGATTTGGG AAAAATATGT TTTAAGAAAT GTAATAGCCA TTTTGTTTTG AAGTATTCTT GTGTGTTTGT GTGCTAGGAG TGATGTTTGA TCTTTCTTAA AACAGCCTCT ACTAAGCTCT AATAAGGCCT CTTCCTCTTA CTTCTGTCTC TAATCAATCT AATGAAACAT ATGGGTTTGT GTATGTGTGT TTGCCAAGGA AGACTTCATA 
Length1240
Protein Sequence
Protein Residue
Map Locationscaffold_7: 5113843.. 5115637
Download Sequence
A.thaliana
AGI-codeAT4G29080.1
Descriptionphytochrome-associated protein 2
TAIR curator summaryphytochrome-associated protein 2 (PAP2)
Alias[IAA27][PAP2][indole-3-acetic acid inducible 27][phytochrome-associated protein 2]
Gene coexpression
MR
MR Locus Description
4.24264 Ahg476699 Walls Are Thin 1
5.65685 Ahg493698 auxin response factor 8
17.4929 Ahg478940
21.4243 Ahg485222 XH/XS domain-containing protein
23.4521 Ahg935936 Major facilitator superfamily protein
26.1151 Ahg481524 plant-specific transcription factor YABBY family protein
27.2213 Ahg950898 myb domain protein 28
28.775 Ahg949703 EXORDIUM like 3
30.3974 Ahg482629 demeter-like 1
34.2491 Ahg929433 Major facilitator superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression