Detail



ID : Ahg492254

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|492254|fgenesh2_kg.7__1687__AT4G25700.1
Sequence
TCTCTCTCTC TCTCTCGCTC GCATAAAAAG GTTAACCTCA AAATGGCGGT AGGACTCTCA ACCGCCGTTA CATTCAAACC TCTCCACCGC TCTTTCTCCT CCGATTTCCG CCTCCGCCAC CCAAAATCCT TATCCGGATT CTCTCCGTCT CTTCGATTTA AAGGCTTTTC TGTCTGTTTC GTCGTGGAGG AGCGAAGACA GAACTCTCCG ATTGAGAACG ATGAACGACC GGAGAGCACG AGCTCAACCA CCGCCATAGA CGCCGAGTAT CTCGCGTTGC GATTGGCGGA GAAATTGGAA AGGAAGAAAT CAGAGAGGTC CACTTATCTA ATCGCTGCAG TGTTGTCAAG CTTTGGTATC ACTTCTATGG CTGTTATGGC TGTTTACTAC AGATTCTCTT GGCAAATGGA GGGAGGTGAG ATCTCAATGT TGGAGATGTT TGGTACATTT GCTCTCTCTG TTGGTGCTGC GGTTGGTATG GAATTTTGGG CAAGATGGGC TCATAGAGCT CTCTGGCACG CTTCTCTATG GAATATGCAT GAGTCACATC ACAAACCAAG AGAAGGACCG TTTGAGTTAA ACGATGTTTT TGCTATAGTG AACGCTGTTC CAGCGATTGG TCTCCTCTCT TATGGATTCT TCAATAAAGG ACTCGTTCCT GGTCTCTGCT TTGGCGCCGG GTTAGGAATA ACGGTGTTTG GAATCGCCTA CATGTTTGTC CACGATGGTC TGGTGCACAA GCGTTTCCCT GTAGGTCCCA TCGCCGACGT CCCTTACCTC CGGAAGGTCG CCGCCGCTCA CCAGTTACAT CACACAGACA AATTCAATGG TGTACCATAT GGACTGTTTC TTGGACCCAA GGAATTGGAA GAAGTTGGAG GAAATGAAGA GTTAGATAAG GAGATTAGTC GGAGAATCAA ATCGTACAAA AAGGCCTCCG GTTCCGGGTC CACTTCTTGA CTTCAAACAA GTTTTAAATC CCAAATTCGT TTTTTTGTCT TCTGTTATCA TCATCCTAAG ACGGTCTATG TTGATAAATC CTATATGCCG ATTTTGATTT TAATGATTAT TTTTAAAAAA TATAAATAGT CTAATTAATT ATATAGCAAT TGTGCGTGTA AGCACTGTAG CGACGATTGA CATATTACGT TGTTTGTTT 
Length1159
Protein Sequence
Protein Residue
Map Locationscaffold_7: 6523302.. 6525238
Download Sequence
A.thaliana
AGI-codeAT4G25700.1
Descriptionbeta-hydroxylase 1
TAIR curator summaryConverts beta-carotene to zeaxanthin via cryptoxanthin.
Alias[B1][BCH1][BETA-OHASE 1][chy1][BETA CAROTENOID HYDROXYLASE 1][beta-hydroxylase 1]
Gene coexpression
MR
MR Locus Description
13.2665 Ahg497022 Transmembrane amino acid transporter family protein
18.1384 Ahg480385
26.9815 Ahg479829
29.3598 Ahg483095 Protein of unknown function (DUF399 and DUF3411)
36.7423 Ahg931833 arginine decarboxylase 1
38.3406 Ahg477094 evolutionarily conserved C-terminal region 8
39.6485 Ahg324943 LHY/CCA1-like 1
43.3705 Ahg945245 manganese tracking factor for mitochondrial SOD2
45.5961 Ahg928292 pyruvate dehydrogenase kinase
52.3068 Ahg950958 MEI2-like protein 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression