| Annotation |
|---|
| Description | jgi|Araly1|488829|fgenesh2_kg.6__1963__AT5G19400.1 |
| Sequence |
ACCGTCTCTA TTTTTTTTTC TCTTCTCTCT TCTCTCTCTC GCGGAAAAAA AAAACCCTAG TTTCTCTCTC CTCTCACCGA TTTTTCCATT CCGATGCTTG TGGTCGCATA GCCATCCCCG CAGATCTGGT AATTCCGGTT ACATATGAAA TAACCTTTGA AACATTTTGA TGGATGATGA CTTTGCAGAT GGATAAAACT ACTGCTTGCT CTCCAAGGGA GCGAGCCAAG TCCATACTTG ATAAGACTTT TGAGTTAGAA AACAAGCGTC GGAAGGCTGC TCAGACTCGA AATCCACCTG ACTTAAATTT GTGGCAGCAA ATTCGTGAGA ATTATGAAGC AATAATTCTT GAAGATCATA CCTTTTCTGA GCAGCACAAC ATTGAATTGA CTCTGTGGCA GTTGCATTAC AAACGGATTG AAGAGTTTAG ATCACACCTC AATGCTAGTA AGGGTCCTTC TAAACCAGAC GTAATTGCAA ACCACAAGCT GCAGTTCAGA ACATTCCTTT CAGAAGCAAC TGGGTTTTAC CATGATATGA TCTTAAAAAT TAGATCAAAG TATGGTCTTC CCCTGGGTTA TTTTTCTGAG GATCAAGAGA CTCAAAATTT GGCTGATAAG GATGGAAAGA AGGTACCAGA AGTTAAATTA GCCTTGGTAT CGTGTCATCG TTGCTTAATA TACCTTGGTG ATCTGGCTCG GTATAAAGGA TTGTGTGGCG AGGGGGATTC CAAGAACAGA GAGTATGCTG CTGCTTCAAG TTACTATTTG CAAGCAGCTT CTCTATTGCC AGCCTATGGA AACCCACATC ATCAGCTTGC TATAGTTGCT TCTTATTTGG GGGATGAGTT TACAACAACA TATCGTTATT TCCGAAGTTT GGCTGTGGAG ATTCCTTTCC CAACTGCCCG TGACAACTTG ATTGTTGCTT TTGAAAAGAA TCGTCAGAGT TATGCCCAAT TGTTTGTGGC TTCCAAAGAC TCATCCAGGA GGCCGACTGG TAAAGGAAGA GGTAAAGGTG AAGATACTTC ATCAAAAGAT GCGAACTTGG TAGCTGGTCC TTTGAAGGAT AAAGTAACTA TTTCAAATGA GATGCTCAAA GCATTCTGCA CTAGATTTCT TCGTCTCAAT GGGATTCTTT TTACCCGAAC AAGCCTGGAG ACATTCTTAG ATGTTCTTGC CTCCACTAGC AGCAGTTTAC GAGAGGTCAT TTCTTTGGGC TCAGTTGACG AACTGAGTTT GGGCATAGAC ACCAGTGACA GCGCACTTTT CATTGTTAGA CTCGTGACAA TTCTTATATT TAGCGTCCAT AACTCAAAGA AAGAGACAGA AGGTCAGTCA TATGCAGAGA TTGTACAGCG TGTTGAGCCT GCCAGAAACT CCTTAACGGC TAGCTTTGAG TTACTTGGAC ACGTAATAGA GAAGTGTGTG CAACTGGGAG ATCCTTTGTC GAGTTACTTC TTGCCCGGTG TCTTAGTTTT TGTTGAATGG TTGGCCTGTT GTCCTGATGT TGCACTGGGA AGTGATCCGG ATGATAGACA GACTGCTGTA AGAAATAGCT TTTGGAACCA GTGTGTTACC TTGTTTAATC AAATCTTGTC GCTTGGACCT ATGTTTATTG ATGATGTCGA AGACGAGACT TGCTTCTCAA ACATGAGCTT GTATGATGAA AGAGAAACTG AAAACCGACT TGCACTATGG GAGGACTATG AACTAAGAGG ATTCTTGCCA CTGCTTCCAG CTCAGACCAT TCTCGACTTC TCAAGGAAAC ATTCCTTTGG AACTGAAGGT CCCAAGGAAA AGAAAGCTCG TATAAAGAGG ATTTTAGCAG CAGGGAAAGC TTTGACCAGT GTGATCAAAG TTGATCAGAA TCATGTATAT TTTGATTCAA AGAAGAAGAA GTTTCTTGTT GGTATAAAAC CGTCAGATGA CTTGCTGGAT TCTCATTCAA GCCCACCTAA AGCTTGTAAT ACTTTGCAAG ATAACCAAGT AATGATGAAT CATAACTCGC CAGTGATGCA GCTTGGTCAG CAGATTTATA TGGGTGAGGA GGATGATGAT GATGAAGTAA TTGTTTTCAA GCCTCTAGCT ACTGAAAAGA AGAAAGAGGC TTCTGACCAA ATATATGTTC CTAGTGGAGG CTTCAGGAAA CCTGATCAAG TTGCTACTAT GGGGGACTTT AAAGCTTTAA GTGGTTCTGA TGCAGCTTTT CATGAAAATC AACTTCTGCA AGCTAGAGGC AATGCGAGTA TTCAAGTACC TGCATCTGTT GGTTCTAACC TTCTGGGACT TCTTCAGCCA TCAACCCAGG CTCAAGCTAT GCATATGCAA CAAGTTCAGA CGCAGGTTCA AGTGCCTGGA TCTGTTGGTT CTAACCTTCT GGGACTTCTT CAGCCATCAA CCCAGTCTAA AGCTATGCAT ATGCAACAAG TTCAGACGCA GGCAGTGAAT CCTCAGCCAG CCCAATCACT AGCTGCTGCA AGACTTCAGC CAATTCAATC ACAGGTCGCA CAACTTCAAC CACTGCCATC ACGGGTTGTG CACTTTCAAC AAACTCAGGC ACAGCTTTCA CATGTTTCAG CGGCCCAGAC ACAATCTGCT TCCTTTGTTG GTGGTAGCAA GTGGTCACCA GAGGAAGCTG CTTCTCTTGC TAGTAGCCTA TCTGGTTTTG CTCAGATGGG TAATGGTCAT CTAATGAGGA ATGAGTTGCA AGGAAATCAT GGAGTTTCCT ATTACCCTGC ACACCCATTA CCGGTCCACC AGTCTTACAA TGTCAATGGT ATGGGTGGTA TGCCATATTC TCAGTCACGA ACATCTGAAG CTGTATTGAC ACCCAACATT GATACTGTTT TGTCATCCGG AGTTGTTGCT GATGGCCTGG GCGTCCAATC TTCGTTAGCA AAGAAAAATC CAATCAGTAG AGCCATTAGG CATCTTGGCC CTCCGCCTGG GTTTAACTCT GTTCCCTCTA AGCTGCAAAA GGAGCCAGCA CCTGGTTCGG ATTTTTCTGG CAACAACAAT CTACCAGTTG ATGATTACAG CTGGTTGGAT GGATACCAAG CTCAATCTTC TCGAGGCGCT GGGCCGAACA GTTCTTTGAA TTACGTCGCC TCTGGGAAAC CAGAACACAT GGGTGGTACC AGCAATGGAC TGAACGGGGT TGCCAATTTT CCGTTTCCTG GAAAACAAGT TCCAACATCA CAGGTCCAAG CAGATTTTCC TTATTTCCAG AACCCTCAGA AAGATACCTT TGTGGACAAA AATCATCAAT CAGCTCAACT CCCTGAGCAA TATCAAGGAC ATTCGACTTG GTCGAGTCGT CACTTTGTGT GAGATCAGAA TGGAAGAGTA ACACGGTAAT TGGGAATGAT TCAGGTGAGT GTTACGCAAC GTTTATTGCT ACCTAACTCC AACTGATCCT TGTTCTGCTG AAGTCTCTAG TTGGAGTCTT TGTGGCCTTG GCTTCTTGTG GGGTACTTCC TACCCGACGG ATTCAGGACA CAGCTCATGT TGGTGAAAGA GATATGTGGT AACAAGAATG AATGGTTCTG TGGAATTGAT AGGAGTAAAG TGCCTTTCTC GTGCTACTTG AGGTGGAGAT GTTAGACCTT ATGAATAAGA AAGGAAACGT ACCTTGTGGC TCACTCTCGA TATCTGAAGC AGTTGTTTGC TGTTTTCTTT TCTTTTTGCG TATAAATGTG TAGCTGTCCG TCCTCTTGCA GCTATCTTTC TCTCTTATTC TATGCTCGTC TCAAACTTCT CTCTGTTTTG CTGTGTCGTT TTAAGTTGAA CTATCATAAG GTGTGTGACA CTTTTCAAGT GCTAATGAAT AAAAAGGGAC TCATGTCATA AAACATGATT TGGTGTTGAA ATGCTTCC |
| Length | 3878 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 7824311.. 7829369 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G19400.1 |
| Description | Telomerase activating protein Est1 |
| TAIR curator summary | Encodes SMG7, a protein that possesses an evolutionarily conserved EST1 domain and exhibits strong homology to human SMG6 (EST1A) and SMG7 (EST1C) proteins. SMG7 plays an evolutionarily conserved role in nonsense-mediated RNA decay (NMD). Required for exit from meiosis. Hypomorphic smg7 alleles render mutant plants sterile by causing an unusual cell-cycle arrest in anaphase II that is characterized by delayed chromosome decondensation and aberrant rearrangement of the meiotic spindle. Disruption of SMG7 causes embryonic lethality. |
| Alias | [SMG7] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1.41421 |
Ahg491819 | protein kinase family protein / WD-40 repeat family protein |
| 2.23607 |
Ahg947489 | Lung seven transmembrane receptor family protein |
| 3.60555 |
Ahg938101 | Duplicated homeodomain-like superfamily protein |
| 4 |
Ahg491768 | autoinhibited Ca(2+)-ATPase 10 |
| 4.89898 |
Ahg937974 | DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding |
| 5 |
Ahg483345 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| 5.2915 |
Ahg481680 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| 6 |
Ahg474272 | alpha-mannosidase 1 |
| 6.32456 |
Ahg492386 | ubiquitin-specific protease 16 |
| 7.93725 |
Ahg483746 | transcription regulatory protein SNF2, putative |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
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