Detail



ID : Ahg479149

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|479149|fgenesh2_kg.3__1850__AT3G16830.1
Sequence
CTTTTCTTCA TTTTCGCTTT GCGACGCGAG GAAATGCAAC CTTGAAACCC TAGAAAACCA TTCCAACTAC GACTAAATCG ATTTCACAAA CTTTGACCTA CCCTTCTTTC ACCATAAACC CAGATCGCTT TAATTCCTTG AATTTCTAGC AAAAATGTCG TCTTTGAGCA GAGAGTTAGT TTTCCTAATC CTCCAGTTCT TAGATGAGGA GAAGTTCAAG GAATCTGTTC ACAAGCTAGA GCAAGAATCT GGCTTCTTTT TTAATATTAA GTACTTTGAA GAGAAAGCTC TTGCTGGAGA GTGGGACGAA GTGGAGAAGT ATCTTTCTGG TTTCACTAAA GTCGATGATA ATCGTTACTC TATGAAAATC TTCTTTGAGA TTAGGAAGCA AAAGTATCTC GAAGCTCTAG ATCGAAATGA CAGAGCAAAA GCTGTTGAGA TATTAGCCAA AGACTTGAAA GTTTTCGCGA CCTTTAACGA GGAGCTTTAC AAGGAGATTA CTCAGCTGCT AACTCTGGAG AATTTTAGGG AAAATGAGCA ATTGTCTAAA TATGGTGATA CGAAATCAGC GAGGTCTATA ATGTATACTG AGTTGAAGAA ATTGATTGAG GCAAATCCTC TGTTTCGAGA GAAGCTAGCC TTCCCCAGTT TCAAAGCTTC TCGCCTGCGA ACTTTGATCA ATCAAAGCTT AAACTGGCAG CACCAGCTAT GTAAAAATCC AAGGCCTAAT CCTGACATCA AGACATTGTT CTTGGATCAC TCTTGCTCAC CATCAAATGG TGCTCGTGCT CTCACTCCTG TGAATCTTCC AGTTGCTGCT GTTGCAAGAC CTTCAAACTT TGTTCCTCTT GGAGTACATG GTGGACCGTT TCAACCTAGC CCTGCCCCGG CTCCTAATGC CAATGCTTTA GCTGGATGGA TGGCAAACCC AAATCCTTCT TCATCAGTTC CATCTGGTGT CGTCGCTGCT TCCCCATTTC CTATGCAGCC AAGTCAAGTT AATGTGTTGA AACACCCTCG GGCACCGTCT AACTCTCTAG GGTTGATGGA TTATCAAAAT GCTGATCACG AGCAACTCAT GAAACGCTTA CGGTCTGCAC AAACATCCAA CGAGGTCACA TATCCTGCCC ATTCTCATCC CGCTGCGTCA CTTGATGACC TCCCTAGAAA TGTCGTGAGC ACAATTCGCC AAGGGTCGGT GGTGATAAGC ATGGATTTTC ACCCTTCTCA TCACACTTTA CTCGCTGTTG GTTGTTCAAG CGGCGAAGTC ACCTTGTGGG AAGTTGGATC CAGAGAGAAG GTTGTCACAG AACCTTTCAA GATATGGAAT ATGGCGGCTT GTTCTGTGAT CTTCCAGGGT TCTATAGTCA AAGAGCCATC GATATCTGTC ACTCGTGTAG CATGGAGCCC AGATGGAAAT TTGCTTGGGG TTTCTTTTAC TAAACATCTG ATCCATGTAT ATGCTTACCA AGGCTCAGAC CTACGTCAGC ACCTCGAGAT TGATGCTCAT GTAGGCTGTG TGAATGACTT GGCGTTCGCC CACCCAAATA AGCAAATGTG TGTTGTGACT TGTGGTGATG ACAAATTGAT TAAGGTGTGG GATTTGAGTG GGAAGAAGCT TTTCACTTTT GAAGGCCACG AGGCACCGGT TTATTCCATT TGCCCTCACC AGAAGGAAAA TATTCAGTTT ATATTCTCAA CAGCTCTTGA TGGAAAGATC AAGGCGTGGC TCTATGATAA TGTTGGTTCT CGGGTTGATT ACGACGCACC AGGACAGTGG TGTACAACAA TGCTCTACAG TGCTGATGGA AGCAGATTAT TTTCTTGTGG TACGAGTAAA GAGGGAGACT CTTTCCTCGT TGAGTGGAAT GAGAGCGAAG GTGCCCTAAA GAGGACATAT TTAGGCTTTA GGAAGAAATC ACCTGGAGTT GTTCAGTTTG ATACAACCCG TAACCGTTTC TTGGCTGTTG GTGAAGACAA TCATGTAAAA TTCTGGGACA TGGACAATAC AAATCTTTTG ACAACTGTTG AGGCTGAAGG AGGACTTCCG AATCTACCCC GACTGAGATT CAACAAGGAT GGGAATCTTC TTGCAGTTAC TACAGCAGAT AACGGATTCA AGATCCTTGC AAATACTGAT GGTCTCAGAA CATTAAGAGC ATTTGAAGCG CGGTCTTTTG AAGCATCTAA AGCATCCATT GATATGAAGG TATCCCCCTC CGCAATGGCT ACAAGCATCA GCCCAGCTAT TGGTAAAATT GAACACATGG ACACAGACTC TCCTGCAAGG CCAACCCCAA TTCCTAATGG AATTGAGGCA ATGTCAAGAA CTATGGAAAA GCCAAGAAAC GTGGACCCTG TTGATAAGTC TAAAACTTTA GAGCTCACAG AAATTGTTGA TCCGACTCAG TGCCGACAAG TAAACATGCC AGATAGCAAG GATTCTGTTA GCAAGGTTGC TCGGCTTCTG TATACAAATT CTGGTGTCGG TGTTTTGGCT CTTGGATCAA ATGGTGTCCA AAGACTATGG AAGTGGAGCC GCAATGAGCA AAATCCAACT GGGAAGGCAA CTGCTAGTGT AACTCCACAG CATTGGCAGC CAAACAGCGG TCTCCTAATG GCAAATGATG TTCCTGAGAA TCCTGAAGGG GCTGTTCCGT GTATAGCGCT TTCTAAGAAT GACTCATATG TAATGTCAGC TTGTGGTGGA AAAGTTTCGT TATTCAATAT GATGACTTTC AAAGTAATGA CAACGTTCAT GCCACCACCA CCAGCTTCAA CTTTCTTGGC GTTTCATCCT CAAGATAATA ACATTATTGC AATCGGGATG GAGGACTCGA GTATACATAT TTACAACGTC AGGGTAGATG AGGTGAAAAC AAAGTTGAAA GGTCACCAGA AGCACATAAC TGGTCTAGCA TTCTCTACCG CACTCAATAT TCTTGTCTCT TCTGGTGCCG ATGCTCAGCT CTTCTTCTGG ACCGCTGACT CGTGGGAGAA GAAGAAATCT TCAGCGATAC AGCTACCACC TGGAAAAGCA CCAGTAGGTG ACACGCGAGT CCAATTCCAT AACGACCAAA TCCAGTTATT GGTTTCACAT GAGACACAGC TAGCCATTTA CGATGCTGCG AAGATGGAAT GCATTCATAA GTGGGTGCCA CAAGACGCTC TCTCGTCGCC CATAACCTCT GCATCTTACT CATGCAACAG CCAACTGGTT TACTCGTCAT TCGCTGATGG AAACATTGGA GTCTTTGATG CTGAATCCTT GAGACTCAGA TGTCGCATTG CCCCATCAGC TTACATGCCT CAACCAACAC CGAACAGTGC ACCGATCATT CCACAGGTGA TCACAACTCA TCCACAAGAA CCGAATCAAT TAGCGGTTGG ACTCTCTGAT GGTTCGGTTA AAGTACTTGA GCCATCGGAA CTTTCTAGAA GATGGGGTGT TGGCGTCACG GCCGGTTCAG ATAAAGCAGG GACTGAAAAT GGACGGCCGT CTAGTTCATC AGCGGCTAAC AACTCAAGTT CAGATCAGAT TCAAAGGTAA AAATAGCTGA TGTCAGTTAA GTTAGTTGAC ATATCTTTTT TATTTTGGAT TGTAAAGTTG TGATAGCTTG TGCTGTTTTT GTAAATGAGA TTCTTAAATT AAATCAGTAG GCGTAATAAC AGTTGTTATT TTTTATTTTT TATTTCGGCG TTATAACAGT TTTAGAAAGG CTATAATACT CTTGAATGTA GTGGCTTTTA ATGTGTATGG ATTTGTCAAA AAT 
Length3773
Protein Sequence
Protein Residue
Map Locationscaffold_3: 6759947.. 6766143
Download Sequence
A.thaliana
AGI-codeAT3G16830.1
DescriptionTOPLESS-related 2
TAIR curator summary
Alias[TPR2][TOPLESS-related 2]
Gene coexpression
MR
MR Locus Description
2.82843 Ahg478454 Clathrin, heavy chain
3 Ahg472338 squamosa promoter binding protein-like 14
3 Ahg333928 global transcription factor group E4
3.74166 Ahg918742 transcription regulators
4.47214 Ahg477983 binding
4.89898 Ahg312915 IQ-domain 32
5 Ahg479740 Topoisomerase II-associated protein PAT1
6.78233 Ahg479265 pyrimidine 1
7.07107 Ahg948606 chromatin remodeling 4
8.18535 Ahg328440 glycine-rich protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression