Detail



ID : Ahg493022

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|493022|fgenesh2_kg.7__2455__AT4G18390.1
Sequence
ACAGTGCTTT TGATGACTCT GCAACAACAG CAGCTGCTTC AGACAAAGCT TAAACGAAGC TGTATCTACT GACTTTGATG GTGAAATATC AAAAACCCTA AATTTATTAA AAAAAAAACA CAATTTTTTT TTTTTTTTGG TTTTTCCTCT GAGGGTTTTC ATCATCAATG CTTACAAAGT ACAGTGGGTA AACAAAACAA AAATATAAAA ACCAATTTTT TTCCACTTCT TTAAATCCCA AACCAACCCT AAAGTTTCGA TTTTTAAATT TGGGGGAAAC CAACAGAAAA AAAAACCCTA ATTTTTTTCT TTGGTCATGA GATTATTGGT GATGATGAAA TGATTGGAGA TCTAATGAAG AATAACAATG GCGACGTTGT GGATAGCGGA AACAACAACC GGTTAAGCCG GTGGCATCAC AATTCTTCCC GGATAATTAG GGTTTCTCGA GCTTCCGGTG GTAAAGATCG ACACAGCAAA GTCTTGACTT CGAAAGGTCC ACGTGACCGG CGTGTCCGGT TATCAGTCTC CACTGCTCTT CAATTCTATG ATCTTCAAGA TCGGTTAGGT TACGATCAAC CGAGCAAAGC TGTGGAATGG TTAATCAAAG CTGCTGAAGA TTCAATCTCT GAGCTTCCTT CACTCAACAA CACTAATTTT CCGACCGATG ACGAGAATCA TCAGAACCAG ACATTAGCAA GAACAGTTGC TGCTGCGAAT TCGTTGTCTA AATCGGCTTG TAGTAGTAAT TCAGACACGA GCAAGAACTC TTCTGGTTTG TCTTTATCAA GATCGGAGCT AAGAGATAAA GCTAGAGAGA GAGCTAGAGA GAGAACAGCT AAAGAGACCA AGGAGAGAGA TCATAACCAC ACTTCTTCGT TTACCGATTT GTTAAATTCC GGTTCAGATC CGGTTAACTC AAACCGGCAA TGGATGGCTT CAGCTCCTTC TTCATCTCCA ATGGAGTATT TTAGTTCGGG TTTAATTCTC GGGTCGGGTC AACAAACCCA TTTCCCGATT TCAACAAATT CTCATCCTTT CTCATCAATC TCCGATCACC ATCATCATCA TCATCATCCA CACCAAGAGT TTTCATTCGT TCCCGACCAT TTGATATCAC CGGCAGGATC CAACGGCGGA GCATTCAATC TTGATTTCAA CATGTCGACA CCCTCCGGCG CCGGAGCTGC CGTCTCCGCC GCATCAGGTG GTGGGTTCAG TGGTTTCAAC AGGGGGACCC TTCAGTCCAA TTCAACAAAT CATCATCAGC ATCAGTCATT TCTCGCTAAT CTACAGAGGT TTCCATCATC AGAAAATGGT GGAGGTCCAC AGTTCTTATT CGGTGCACTG CCTGCAGAGA ATCACCACCA CAATCACCAG TTTCAGCTTT ACTATGAAAA TGGATGCAGA AACTCATCAG ACCATAAAGG TAAAGGCAAG AACTGATGAT ATTAATTATT GCATCTTTGG TTTAATTCAG ATCCTCATTT TGTATGTTTA ATTTTTGGTT TATTTCAAAA CAAATGTTAA TCTCTTTTGT TGTCTGATCT GTGTTAGGGT TTTTTTTTTG TAATGTTTTG AGGGTCTTTT GAAATCTGTT AGCATTGTAT TTGTAATGTT GTATTTGTGA TAATACCATT TTGTTTGTGA GTTTATAATT CAATTTTTGA GTGTTATTTT TGGCATGAAA TT 
Length1692
Protein Sequence
Protein Residue
Map Locationscaffold_7: 10141706.. 10143455
Download Sequence
A.thaliana
AGI-codeAT4G18390.1
DescriptionTEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2
TAIR curator summary
Alias[TCP2][TCP2][TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2]
Gene coexpression
MR
MR Locus Description
5.38516 Ahg943375 Auxin-responsive GH3 family protein
5.47723 Ahg494014 homeobox protein 23
11.225 Ahg926966 Pathogenesis-related thaumatin superfamily protein
16.9706 Ahg939656 pseudo-response regulator 7
19.5192 Ahg939212 Fatty acid/sphingolipid desaturase
21.8174 Ahg476671 NmrA-like negative transcriptional regulator family protein
27.6043 Ahg480498 Ribosomal L28e protein family
31.8119 Ahg317012
32.249 Ahg470636 myb domain protein 13
32.619 Ahg475142 MATE efflux family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression