| Annotation |
|---|
| Description | jgi|Araly1|939212|scaffold_503403.1 |
| Sequence |
GAGCTTTTGG TTCGTTATCA ATGGCGGAAG AGACGGAGAA AAAGTACATT ACGAACGAAG AACTTAAAAA ACACAACAAA TCTGGGGATC TATGGATCGC GATTCAAGGC AAGGTCTACA ACGTCTCCGA TTGGATTAAA ACTCATCCCG GTGGCGACAC CGTGATTCTC AATCTCGTTG GTCAAGACGT CACCGATGCT TTCATCGCAT TTCATCCCGG AACCGCTTGG CATCATCTCG ACAATCTCTT CACCGGTTAC CACATCAGAG ATTTCCAAGT CTCTGAAGTC TCACGCGATT ACCGTCGCAT GGCTGCCGAG TTTCGTAAAC TCGGTCTCTT CGAAAACAAA GGTCACGTTA CTCTCTACAC TTTAGCCTTC GTCGCCGCCA TGTTCGTCGG CGTTCTCTAC GGTGTTTTGG CTTGTACTTC CGTCTTCGCT CACCAAATCG CCGCCGCGCT TCTCGGACTC CTCTGGATCC AGAGCGCTTA CATAGGTCAC GATTCAGGTC ATTACGTAGT CATGTCGAAC AAATCTTATA ACAGATTCGC TCAGCTTCTC TCCGGTAACT GTCTCACCGG AATCTCAATC GCTTGGTGGA AATGGACTCA CAATGCTCAT CACTTAGCTT GTAACAGCCT CGATTACGAT CCAGATCTAC AACACATCCC TGTCTTCGCC GTCTCCACCA AATTCTTCAA CTCATTGACA TCACGATTCT ACGATCGGAA ACTCACGTTT GATCCAGTCG CGAGATTCTT GATCAGCTAT CAACACTTTA CTTATTATCC AGTTATGTGC TTCGGAAGAA TCAATCTCTT CATTCAAACG TTTATCTTGC TCTTCTCCAA ACGTGAAGTC CCAGATCGTG CTTTAAACTT CGCCGGAATC TTAGTCTTCT GGACTTGGTT CCCTCTCTTA GTCTCATGTC TACCAAACTG GCCTGAAAGA TTCTTCTTCG TCTTCACAAG CTTCACCGTC ACGGCGCTTC AACACATTCA ATTCACGCTT AACCATTTCG CTGCGGATGT CTACGTTGGT CCACCCACAG GTAGCGACTG GTTCGAGAAG CAAGCTGCAG GAACAATCGA TATCTCTTGT AGATCATACA TGGATTGGTT CTTTGGTGGA TTACAGTTTC AGCTTGAGCA TCATTTGTTC CCTCGGCTAC CTCGTTGCCA TCTCCGGAAA GTTTCTCCGG TGGTTCAAGA GCTTTGCAAG AAGCATAATC TTCCTTATAG GAGTATGTCG TGGTTTGAAG CAAATGTGTT GACTATTAAC ACTTTGAAGA CAGCAGCTTA TCAAGCTAGA GATGCGGCTA ATCCGGTGGT TAAGAACTTG GTTTGGGAAG CTTTGAATAC TCATGGCTAG TGATTTTAAT CAAAACAAAA |
| Length | 1390 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 19234997.. 19236386 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G61580.1 |
| Description | Fatty acid/sphingolipid desaturase |
| TAIR curator summary | |
| Alias | [AtSLD1][SLD1][sphingoid LCB desaturase 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2.44949 |
Ahg921302 | gigantea protein (GI) |
| 3.16228 |
Ahg495863 | CONSTANS-like 5 |
| 5.47723 |
Ahg488447 | stress-responsive protein (KIN2) / stress-induced protein (KIN2) / cold-responsive protein (COR6.6) / cold-regulated protein (COR6.6) |
| 5.65685 |
Ahg939656 | pseudo-response regulator 7 |
| 6 |
Ahg944923 | Low temperature and salt responsive protein family |
| 6.245 |
Ahg929366 | Phototropic-responsive NPH3 family protein |
| 7.74597 |
Ahg943375 | Auxin-responsive GH3 family protein |
| 7.93725 |
Ahg496615 | dentin sialophosphoprotein-related |
| 12.0416 |
Ahg481880 | phosphate transporter 4;1 |
| 12.6491 |
Ahg483346 | cold regulated 15b |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|