| Annotation |
|---|
| Description | jgi|Araly1|493056|fgenesh2_kg.7__2489__AT4G18120.1 |
| Sequence |
CTTCTCCATC CAATTAAAGA TTCTCTCTTT TTAATAATGC TTTCAAAAGA ATTCACGAAT AATCAATTTT TTTATATTTA TTTTCTCTCT TCTTTATCAA TGTGTATATA TATATATAGA GTCAGAGAGA AAGCGTTTCT TCTGTATTCG TGGGAGAGGA CAAATTATTG AAGTTCGTTG TTGCGAAGAA GCGGAGTTAA TCGAAGTGCA GGGCTTTCGC AATGAATATC CCAAATGGAA CCTTCTCAAG ATCTGATCAT TTCCATGCTT CAAGTGATGC TTCTCTCTTT TCCAGTTCTC TACCTGTTCT TCAACACCAA AACCTCAACC CTCGCGCGAG CTACCATCAG TCTGTTGATG AAATTGCTTC CGGCTTAAAT CAATACAATG GAGGCATTGG CAATATGCTT GATGATGGTG AGTCACATCC AATCGGAAGC ATGCTTCCCG ATGATGAGGA AGAGCTTTTC TCTGGTCTAA TGGATGATTT AAACTTAAGT TCTTTGCCTG CTATGTTGGA TGACTTGGAA GATTATGATT TATTTGGTAG CGGAGGAGGG CTTGAACTGG AGACTGACCC ATATGACAGT CTAAACAAGG GCTTCTCAAG AATGGGTTTT GCTGATTCTA ACGTTGACAA TGGTATGCCT CAAAACATTT TCCAAAATGG AGTGGGATCG ATTGCTGGCG AACATCCTTA TGGTGAACAT CCTTCAAGGA CTCTGTTTGT TCGGAATATT AACAGTAACG TTGAGGATTC TGAATTGCAA GCTCTTTTTG AGCAATATGG AGATATCCGA GCTCTCTATA CAGCCTGCAA GCACAGGGGA TTTGTAATGA TCTCTTATCA CGATATCCGC AAGCTAATTA AACGGAGGAA ACTGGACATA CATTTCTCAA TCCCCAAGGA TAATCCATCT GATAAAGATG TTAATCAAGG AACTCTTGTG GTTTTCAACT TGGCTCCATC AGTTTCCAAC AGAGACCTTG AAAATATATT CGGTGCTTAT GGCGAGATCA AGGAGGTACG GGAAACACCA AATAAGAGGC ATCACAAATT TGTTGAATTT TTTGACGTTA GATCAGCTGA TGCAGCTCTC AAAGCTTTGA ACAGGACTGA CATTGCTGGA AAACGTATCA AGCTTGAACA TAGTCGTCCT GGTGGTGCTC GTCGAAACAT GATGTTGCAA ATGAATCCGG AATTGGAGCA AGATGATTCC CACAGCTACC CGAATCATGT TGAGTCGCCT TTAGCAAGCT CTCCTCTAGG GAACAAGTGG TATAATAGTC CTGTTGATCA TCCTCTACAA AGTTTCAGTA AGTCTCCAAT ATTTGGAAAC TTGAGTCCAA CAAAGAACAT CCATTATCCA GAATTTTCGT CAATTATGCA TTCTCAAGAA GCAAATCCGA TAAAGGCTGC ATCGGTGAAC AATGACCAAG AAGGAAGATG GTTTAGCCAC TTGGATCACC TGTTTTCACG TAGCAGCTAT AATAATGCAA GCCACAAAGC TTCTACCTTT CAGCAACCAC AGTCCTTTGG ATCTGTTTCT TCATTTGGTT CTTTGAACTC ACACCCGAGT CACGTAGAAA CATTATCTGG ATCAGAGTTC CTGTGGGGAA GCCCTAGTTC TTCAGCCTGG CCTGTGAATC CATTCTCTTC AAACGTAAAA AATAACAGGT TTTCTTACTC AGCTCAGAAC GGGTCGCTCC ACCAGCTCCA TCATGTTGGA TCTGCGCCAT CTGGATTCTT CCCGAGGTCC CCTGAAACTT CATCAATGGC TTTCCGAGGA GCAAGTGGTC ATATGAATTC TCAAAGAAAC TTACGTGAAA CTAGCTCTCC AAGATTTAAA ATGTTGTCTT CTCCAAGACT TAGTCAATTG TTTACGGGCA ATGGCTCTTA CCACTTACCT GTTCCTACAA TGGCTTCCAT TGACGACCCA TTGGAGGTTG GAAGGAACCA ACAGTTTGAT AGTAACGTTA ACCAAGTCGA CATCAAGATA CAGTTTCAGC TTGACTTGAG TAAGATTATG AGGGGTGAAG ATCCACGGAC AACCTTGATG ATAAAAAACA TCCCTAATAA GTATACCCGG AATATGCTGT TAGCTGCCAT CGACGAGAAA AACAGTGGAA CTTATGATTT TCTATATTTG CCTATTGATT TCAAGAATAA ATGTAATGTG GGGTATGCAT TTATCAATAT GGTGTCTCCT AAATTCATCA TTGCACTGTA CGAGGCCTTT AATGGAAAAA AATGGGATAA GTTCAACAGC GAGAAAGTTG CTTCGTTGGC TTATGCACGA ATCCAAGGTA AAGCTGCGCT TATTGCTCAC TTTCAGAACT CGAGCTTGAT GAACGAAGAT AGGAGATGCC AACCTATTGT CTTTGATGGA TCAGAATCTA AATATCCGAT CATCCGGGCG AATTCGCAGC TCGAGGCATC AAATTCAACG GTTTCTCATC CTGTAGTCAG CGAGGGCACG CATCAAAGCT GACAGTGAAG TGAATCCCAT TATTTCCTTC GGTTTAAAAC GTAAATATCA GTTTTTAGGA TGAGATGATG ATGACTTTAG AAAATTTTCT GGTTTTCTCA GATCTTTCTG GTTGTTTGGT TTCCGGAATC AGAAAGTATT ATTTGATCTA GACATGTAAA TTGATGGTTG TGTTTTTTTT GTCCTGGTTG GCCAAATCAT CTCTCCACAA TGTATACATA GGATAGTTTA GATACA |
| Length | 2726 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 10331794.. 10336015 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G18120.1 |
| Description | MEI2-like 3 |
| TAIR curator summary | A member of mei2-like gene family, predominantly plant-based family of genes encoding RNA binding proteins with characteristic presence of a highly conserved RNA binding motif first described in the mei2 gene of the fission yeast S. pombe. In silico analyses reveal nine mei2 -like genes in A. thaliana. They were grouped into four distinct clades, based on overall sequence similarity and subfamily-specific sequence elements. AML3 is a member of two sister clades of mei2-like gene family, AML1 through AML5, and belongs to the clade named ALM235. Among mei2-like genes, AML3 is the transcript with highest frequency of alternative splicing. Expression was detected during early embryo development (heart and torpedo stage); no accumulation was detected in vegetative and floral apices, as revealed by in situ hybridization. |
| Alias | [AML3][ML3][MEI2-like 3] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 10.6771 |
Ahg929332 | metallothionein 3 |
| 11.6189 |
Ahg930399 | heteroglycan glucosidase 1 |
| 13.8564 |
Ahg484373 | Regulator of chromosome condensation (RCC1) family protein |
| 14.4914 |
Ahg490488 | TRAF-like family protein |
| 17.2047 |
Ahg471143 | Zinc finger C-x8-C-x5-C-x3-H type family protein |
| 17.8885 |
Ahg321400 | UDP-Glycosyltransferase superfamily protein |
| 19.2094 |
Ahg474663 | CBS domain-containing protein / transporter associated domain-containing protein |
| 21 |
Ahg491400 | gamma vacuolar processing enzyme |
| 21.7945 |
Ahg487145 | Family of unknown function (DUF662) |
| 22.5832 |
Ahg477464 | Regulator of chromosome condensation (RCC1) family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|