| Annotation |
|---|
| Description | jgi|Araly1|948528|scaffold_800415.1 |
| Sequence |
CTGATTTGCA AGTCAAGAGC GATGAGACTC GATCAAGAAG ATCTAGACTT GACGAATGAT GATAATTTCA TCGACAAGGA AAAGCTTTCA GCTCCTATTA AGTCTACTGC AGATAAATTC CAGCTCGTTC CCGAGTTCTT GAAGGTGAGA GGACTTGTGA AGCAACACCT CGATTCGTTC AATTACTTTA TCAATGTCGG GATAAAAAAG ATTGTTCATG CAAATTGTCG TATTGCATCT GTAACAGACC CATCAATCTA CCTAAGGTTT AGGAACGTCA GAGTTGGTGA ACCGTCAATT ATGAACATCA ATATATCAGA TGAAATTAAT CCGCACATGT GCCGATTAGC AGACATGACA TATGCTGCTC CAATATATGT CAATATAGAA TATGTTCACG GAAGTCATGG AAAGAAAGCA ACAAGTGTAA AGAATGATTT TATTATCGGA AGGATGCCTA TTATGTTGCG GAGTTGCCGC TGTGTATTAC ATGGAAAAGA TGAAGAGGAA CTTGCAAGAT TGGGTGAGTG CCCTCTTGAT CCTGGAGGAT ACTTCGTCAT CAAAGGAACT GAGAAGGTGT TGTTGATACA AGAACAACTT TCGAAGAACA GAATTATTAT TGATTCTGAT AAAAAAGGGA ACATAAATGC ATCTGTCACA AGCAGCACTG AAATGACGAA AAGCAAAACA GTTATTCAGA TGGAAAAGGA GAAGATATAT TTATTTCTTC ATCAATTTGT AAAAAAGATT CCAATTGTAA TTGTCCTAAA AGCTATGGGA ATGGAGAGCG ACCAAGAGAT TGTACAAATG GTTGGAAGGG ATCCCCGTTT TAGCGCATCA CTCTTACCTT CTATTGAGGA GTGTGTTAGT GAAGGTGTGA ATACACAAAA ACAAGCACTG GACTATCTTG AGGCAAAGGT GAAAAAAACA TCATACGGAC CTCCACCTGA AAAGGACGGA AGAGCTCTAT ACATCCTCAG AGATTTATTC CTTGCGCATG TACCTGTGCG TGACAACAAT TTTCGTCAAA AATGTTTCTA TGTTGGCGTG ATGTTGAGAC GAATGATTGA AGCAATGTTA AACAAAGATG CGATGGATGA CAAGGATTAT GTTGGTAACA AGCGGTTGGA GTTATCTGGA CAACTAATGT CTCTTCTCTT TGAGGATTTG TTCAAAACGA TGCTCAGTGA GGCCATTAAA AAAGTAGATG CTATTCTTTT AAAACCAAGC CGGGCTAGCC GATTTGATTT TTCTCAGTAT CTTACTACTG GAGACAGTCA TAACAGTATT TCTTTTGGAC TAGAAAGAAC CCTTTCAACG GGAAACTTCG ATATTAAAAG GTTCAGAATG CATAGAAAAG GCATGACACA GGTCTTAACA AGGTTATCTT TTATCGGGAG CTTGGGGTTT ATCACGAAAA TTTCACCACA ATTTGAAAAG TCAAGAAAAG TAAGTGGGCC TAGATCATTG CAACCCAGCC AGTGGGGCAT GCTCTGCCCA TGTGATACCC CAGAAGGCGA ATCTTGTGGG CTTGTCAAGA ACTTGGCTTT AATGACTCAT GTCACAACAG ATGAAGAGGA AGGCCCATTG GTTGCTATGT GCTACAAATT GGGTGTTACA GATCTGGAAG TATTATCAGC AGAGGAGCTG CATACTCCGG ACTCATTTTT GGTCATATTG AATGGGCTAA TACTTGGCAA ACATAGAAGG CCACAGTACT TCGCCAATTC ACTTAGAAGG CTGCGTAGAG CTGGAAAAAT TGGCGAGTTT GTCAGTGTGT TCACCAACGA AAAGCAGCAT TGTGTTTACG TTGCATCTGA TGGTGGGCGG GTTTGTCGTC CACTTGTTAT AGCCGATAAA GGAATATCAA GAGTTAAACA ACACCACATG AAGGAATTAC AGGATGGGGT TCGCACTTTT GATGACTTTA TTCGTGACGG TTTGATCGAG TATCTTGATG TCAATGAGGA AAACAATGCA TTGATCGCTT TATATGAAAG TGAAGCCACT ACGGAACTGG ATGAAGGAGC AGAAGCTGCT AAGATAAGGG CAGACATAAC CCACATTGAG ATTGAACCTT TCACCATCTT AGGTGTTGTT GCTGGTCTTA TTCCCTACCC TCACCATAAT CAGTCACCTA GAAATACGTA TCAGTGTGCT ATGGGGAAAC AAGCTATGGG AAATATTGCT TACAACCAGT TAAACCGGAT GGACACATTG CTTTACCTAT TAGTGTATCC TCAGCGACCC CTGTTGACAA CAAGGACAAT TGAATTGGTT GGATACGATA AACTTGGAGC AGGTCAAAAT GCAACAGTTG CTGTTATGAG TAATTCTGGA TATGACATAG AGGATGCAAT AGTGATGAAC AAATCTTCCT TGGATCGTGG TTTTGGCCGC TGCATTGTTA TGAAAAAAAT TGTTGCTACG TGCCAGAAGT ATGAGAACGG TACAGTAGAC AGAATACTCA TGCCACAAAG AACAGGCCCA GATGCAGAAA AGATGCAGAT ACTGGATGAT GATGGAATTG CTTCTCCAGG GGAAATTATC AGACCGAATG ATGTTTATAT ATATAAACAA ATCCCTGTGT GCACAACAAG AGATAAGATT ACATCCCCGC TATCTGATAG TCAATACCGT CCGGCCAGAG AGTTTTTTAA AGGTCCTGAA GGGGAGACGC AAGTGGTCGA TAGAGTTGCT CTCTGTTCTG ATAAGAGTGG CAGTTTATGC ATCAAATATA TCATACGACA TACTCGTCGA CCAGAGCTTG GCGACAAATT CAGCAGTAGG CATGGGCAGA AAGGTGTATG TGGTACAATT ATTCAGCAAG AAGATTTTCC ATTTTCTGAG CTTGGAATTT GCCCTGATTT GATCATGAAT CCTCATGGGT TTCCAAGTCG TATGACAGTT GGTAAGATGA TTGAACTCCT TGGAAGCAAG GCTGGCGTTT CTTGTGGTAG ATTTCATTAT GGTAGTGCTT TTGGAGAAAG AAGTGGTCAT GCTGACAAGG TTGAGACTAT AAGTAAGACC CTTGTGGATA AAGGGTTTTC ATACAGTGGG AAGGACTTGT TATACTCAGG TCTCAGTGGC GAGCCATTGG AAGCATACAT CTTTATGGGG CCGATATATT ACCAGAAATT GAAACACATG GTTTTGGACA AGATGCATGC GCGAGGGAGT GGACCACGTG TCATGATGAC AAGACAGCCT ACTGAAGGGA AATCTAAGAA TGGAGGTTTA AGAGTGGGAG AAATGGAACG AGATTGTCTT ATTGCTTATG GGGCCAGCAT GTTGATCTAC GAGCGGCTCA TGATTTCTAG TGATCCTTTT GAAGTTCAGG TTTGCAGAGC TTGTGGTTTG TTGGGATATT ACAATTACAA GCTTAAAAAA GCAGTTTGTT CAACATGTAA AAATGGCGAT AACATTGCTA CTATGAAACT CCCATATGCA TGCAAGCTAC TATTCCAGGA ACTCCAGTCC ATGAATGTTG TTCCGCGTCT GAAACTTGTA GAGGCTTGAT CTCAGGGAAA CGTTATCAA |
| Length | 3539 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 2293173.. 2303693 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G45140.1 |
| Description | nuclear RNA polymerase C2 |
| TAIR curator summary | Encodes a subunit of RNA polymerase III (aka RNA polymerase C). |
| Alias | [NRPC2][nuclear RNA polymerase C2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 6.9282 |
Ahg920318 | ARM repeat superfamily protein |
| 7.54983 |
Ahg470695 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| 13.2665 |
Ahg471469 | ARM repeat superfamily protein |
| 13.4164 |
Ahg477059 | vacuolar H+-pyrophosphatase 2 |
| 22.2935 |
Ahg313639 | nuclear RNA polymerase A2 |
| 22.891 |
Ahg935276 | Sas10/U3 ribonucleoprotein (Utp) family protein |
| 24 |
Ahg935440 | ARABIDILLO-1 |
| 24 |
Ahg943901 | phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putative |
| 24.8193 |
Ahg495232 | cleavage and polyadenylation specificity factor 160 |
| 27.2029 |
Ahg316209 | CCAAT-binding factor |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|