| Annotation |
|---|
| Description | jgi|Araly1|493257|fgenesh2_kg.7__2690__AT4G16280.3 |
| Sequence |
ATGAATGGTC CTCCAGATAG AGTAGATTTT CAGCCGATGC GTCCTCGGAA TGGTGGAAGT TTTCGGCCTA TGGGTTTTGC CTACGATGAT GGTTTTCGTC CGATGGGTCC TAACGGTGGC GTAGGAGGAG AAGGGACGCG GTCAATTGTT GGAGCTGGCG GTGGCAGAGG AGGATTTCGG TCTAACGGAC CCGCGAAGTT TCCGCCTTCA GAGAGTCCAG ACGGGAGGAG ATTTATCGGT AAAGCAATGG AGTCTGATTA TTCTGTAAGG CCGACTACAC CGCCGGTCCA ACAGCCTCTT TCTGGTCAGA AACGAGGGTA TCCTAGCTCA GATCATGGCA GCTATACTGG AGCTGATGTT TCTGATCATA GCAGTATTGT CAAGCTTTTT GTTGGCTCCG TACCAAGGAC AGCTATAGAA GAAGAAGTTC GTCCCTTTTT TGAAAAGCAT GGAAATGTTC TGGAGGTTGC TTTGATCAAG GACAAGAGAA CTGGACAGCA GCAAGGCTGT TGTTTTGTAA AGTATGCAAC TTCTAAAGAT GCGGATAGAG CCATTAGAGC ACTGCACAAT CAGATCACTC TTCCTGGGGG AACTGGTCCT GTTCAAGTTC GATATGCTGA TGGGGAGAGA GAACGCATAG GCACGCTAGA GTTTAAGCTT TTCGTTGGTT CACTAAACAA GCAAGCCACT GAAAAAGAAG TTGAAGAGAT ATTTTTACAA TTTGGTCGCG TAGAAGATGT CTATCTCATG CGTGATGAAT ATAGACAGAG TCGTGGATGC GGGTTTGTTA AATATTCAAG CAAAGAGACG GCAATGGCAG CTATCGATGG TCTCAATGGA ACTTATACCA TGAGAGGTTG CAATCAACCA TTGATTGTTC GATTTGCTGA TCCAAAGAGA CCTAAACCTG GCGAGTCAAG GGACATGACA GCTCCTGTTG GACTTGGTTC AGGGCCTCGT TTTCAAGTTT CAGGACAAAG GCCTACCTCT AACTTTGGTG ACTCTAGTGG GGATGTAAGC CACACAAATC CTTGGCGTCC AGCGAATTCA CAAAACGTAG GTCCACCTAG TAACACTGGG ATCCGTGGTG CCGGAACTGA CTTTTCCCCT AGACCAGGTC AAGCAACATT GCCTTCAAAT CAGGGTGGCC TGTTTGGTGG TTATGGTGTT CCTCCCCTTA ATCCTCTTCC AGTCTCTGGA GTTTCATCTT CTGCCAAATT GCAACAGCAA AATCGGGCAG CTGGCCAGCA AATATCACCA TTAAAAAAAC CTCTTCACAG TCCACAGGGT CTCCCCCTAC GTCCACATTT CCCTGGGGCC CAGGCACCCT TGCAGAATCC TTATACTTAT AGCAGCCAGT TGCCTTCCTC TCAGCTGCCG CCACAGCAAA ACGTCACTCG TGCAACTGCT CCTCAGACTC CTTTGAACAT TAATCTACGG CCAACACATG TGTCTTCTGC ATCTGATCAA TTTCCCCCTC GTTCCCAGCA GCAACCGCTA CAAAAGATGC AACATCCTCC TTCTGAGCTA GCTCAGCTCT TGTCACAGCA AACTCAGAGT CTACAAGCAA CACTCCAATC GTCTCAGCAA GCAATATCTC AGCTGCAGCA GCAGAATGGC CAAGCTGGTA AACAGCAGGT ATGATAAGTC AGAGCGTGGT TTCTGTCAAA TGTACCTGGA CCGAGCATAC CTCGCCTGAT GGATTTAAAT ATTATTACAA TGGTCTAACG GGTGAAAGCA AGTGGGAAAA ACCTGAGGAA ATGATAGTGT TCGAACGAGA GCAACAGCAA CAGCAACAAC ATCAAGAAAA GCCAACTATA CAGCAGCCCC AGACCCAATT ACAGCCGTTG CAGCAACAAC CACAACAAGT TCACCAGCAA TATCAAGGCC AGCAATTACA GCATCCGTTT TATTCTTCAC TGTATCCAAC TCCAGGGTCC AGCCATAATG CTCAGTATCC ATCATTGCCA GTTGGTCAAA ACAGCCAGGT ATATATCTGA ACCTGTGGAC TTATTTTTCA GGACTATGCT CGGACACATA TACCCGTGGT GGGAGCTGCT TTAATGAATG ATCTATCAAG AACTCAACAG AGACGTCAAT CTCCCCAAGA ACTCATGTGG AAGAATAAAG CTTGAG |
| Length | 2136 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 11395847.. 11403219 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G16280.2 |
| Description | RNA binding;abscisic acid binding |
| TAIR curator summary | Involved in the promotion of the transition of the vegetative meristem to reproductive development. Four forms of the protein (alpha, beta, delta and gamma) are produced by alternative splicing. Involved in RNA-mediated chromatin silencing. At one point it was believed to act as an abscisic acid receptor but the paper describing that function was retracted. |
| Alias | [FCA] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 6.48074 |
Ahg931437 | tetraspanin2 |
| 12.2066 |
Ahg496070 | telomeric repeat binding protein 1 |
| 15.2315 |
Ahg472501 | Phosphoinositide phosphatase family protein |
| 19.2873 |
Ahg318821 | |
| 21 |
Ahg938459 | mitogen-activated protein kinase phosphatase 1 |
| 22.0907 |
Ahg471132 | NF-X-like 1 |
| 31.4006 |
Ahg487067 | ubiquitin-protein ligase 4 |
| 32.5576 |
Ahg471472 | RNA-binding (RRM/RBD/RNP motifs) family protein |
| 32.8634 |
Ahg490606 | |
| 34.9285 |
Ahg484774 | Mevalonate/galactokinase family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|