| Annotation |
|---|
| Description | jgi|Araly1|493298|fgenesh2_kg.7__2731__AT4G15880.1 |
| Sequence |
TTTTCTTCTA CAGAACCCTA ATTTCACGTT CTAGGTTTCA ATATCTCTCT CTTATGATTC TCATTTCTTT GATTCCCCAA TCTCTAGGGT TTAGTGTTTT ACCCAAATTC ATACCCTAAT GGGTGCCGTA GCGATCAATC GTAAACGCAG CGACGAATCC TTCAATTTCA ATCAACAATC AACCAACCCT TTACGAAATT CACCGTATTT CCAAGCTTCC AAGAAACGAA GATTCTCATT CGCTATGTCT GAAGATTCAG GTAAGCCAGC TTCTTCGTCT TCAAACCCAA CAATCTCGAG GATTTCAAGG TACCCTGATG CTAAAGCTCC TCTTAGACGA GAAATTCATG CTCCTAGTAG AGGCATTCTT AGATATGGGA AAGCTAAATC TAACGATTAT TGCGAAAAGG ACGGAAATTT CTTTGTTCGT AAGTATGATG ATGCAAAGAG ATCAGCTTTG GAAGCTTTGA GATTTGTTAA GAAAGATAAA GATTTTGTTG ATTTGGGTGA TGAGGTTGAA AAAGAAGCTG TTGTTTCTGA TGATTCAAGT GTTGAAGAGA TTGTAGTTGT TGATTGTGAT GATGAGGAGG AAGATTTGGT TGGGGAGAAG AAGAAGAAGA AGAAGAAGAA GAATCAGCCT TCTTTTTCTT CTGGTGTTAC GGATGTTAAG AAAGGGGATA ACTTTAGAGT TGAGGATACT AGTATGATGC TGGATTCGTT GTCTTTAGAT AGAGATGTGA GTGATGCTTC GAGTCTTGAA GCTTATAGAA AGCTTATGCA AAGTGCGGAG AGGAGGAATT CGAAGTTGGA AGCTTTGGGT TTTGAGATTG TGTTGAATGA AAAGCGGTTG TCACAGCTGC GTCAGTCTCG CCCGAAGCCT GTGGAAAAAC GTGTTGAGGT GCCTCGTGAA CCTTTTATAC CTCTCACAGA AGACGAAGAG GCTGAAGTCA ACCGTGCCTT TTCTGGGAGA AACAGAAGGA AAGTCTTGGC TACTCATGAA AACTCAAACA TTGATATTAC TGGAGAAGTT CTACAATGCC TTACACCATC TTCATGGCTA AACGACGAGG TTATCAATGT CTACCTTGAA CTACTCAAAG AAAGAGAAAC TAGAGAGCCC AAAAAGTATT TGAAGTGTCA TTTCTTCAAT ACATTTTTTT ACAAAAAGCT GGTGAGCGAT TCTGGTTATA ATTTTAAAGC TGTCAGGAGA TGGACTACGC AGAGAAAGTT GGGATATGCT CTTATTGACT GTGACATGAT ATTTGTTCCC ATCCACAGGG GTGTACATTG GACCTTGGCA GTAATTAACA ACAGGGAAAG GAAGCTGTTG TATCTTGATT CACTGAATGG AGTTGATCCT ATGATTTTGA ATGCTCTGGC AAAATACATG GGCGACGAAG CGAAGGAAAA AAGTGGAAAA AATATTGAAC TTAATTCGTG GGAGATGGAA TTTGTTGAAG ACCTTCCCCA ACAAAAGAAT GGGTATGACT GTGGAATGTT TATGCTTAAG TACATCGATT TTTTCAGTAG AGGCCTGGGG CTATGTTTCA GCCAGGAACA CATGCCATAC TTCCGACTCA GAACAGCTAA AGAGATTCTG AGACTACGAG CTGATTGAAG TTGCTTGAGC TAATTAATGT GTTTTCAGCT TTTAGGAATG CTATTTTTGC TTGCCATTGT TTATTTGTTC GAACTTTAAA TCCCACTTCT TTTAGGCAGT GAAGCACTCA GCTTCAATAG CAGAGGTAAA CACTGAGTCA AGCCCAGAGC TCTTAGCTCC TTTTATTGTA TTTTTCTTTT TTTGTTTTAA AATGTAGATG AAGCGT |
| Length | 1826 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 11763835.. 11767286 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G15880.1 |
| Description | Cysteine proteinases superfamily protein |
| TAIR curator summary | EARLY IN SHORT DAYS 4 Arabidopsis mutant shows extreme early flowering and alterations in shoot development. It encodes a SUMO protease, located predominantly at the periphery of the nucleus. Accelerates the transition from vegetative growth to flowering. Probably acts in the same pathway as NUA in affecting flowering time, vegetative and inflorescence development. |
| Alias | [ATESD4][ESD4][EARLY IN SHORT DAYS 4] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1.41421 |
Ahg495374 | RNA-binding KH domain-containing protein |
| 3.4641 |
Ahg938693 | Glycosyl transferase family 4 protein |
| 6.9282 |
Ahg477969 | PAS domain-containing protein tyrosine kinase family protein |
| 10.9545 |
Ahg317081 | SNF1 kinase homolog 10 |
| 20.7846 |
Ahg494272 | casein kinase II beta chain 1 |
| 21.9089 |
Ahg481325 | Transcriptional factor B3 family protein |
| 23.5797 |
Ahg494356 | ornithine-delta-aminotransferase |
| 24 |
Ahg330119 | zinc ion binding |
| 25.04 |
Ahg319075 | |
| 30.9839 |
Ahg936621 | methyltransferases |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|