Detail



ID : Ahg493304

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|493304|fgenesh2_kg.7__2737__AT4G15800.1
Sequence
TTTCAAACCT CCAAAAAAAA AAAAGCTCAG AGAAAGAAGA AAGAAACAAT GAGAGGACTC TCCACAAAAT CCGGTGCGAT ACTCATCGCA ATCCTCACCT TCAACTTCTT ATTCGCCGCC GTAACCTCTC AATCCACCGG ATTCACAGGT GATTTCATGC AAATCGATTC AAAATGCAAC GGTACCATCG CCGAGTGCTC TTTATCAACG GCGGAGGAGT TCGAGATGGA CTCTGAGATC AACAGGCGTA TTTTAGCAAC AACGAAGTAT ATAAGCTACG GTGCGCTGAG GAGAAACACA GTTCCTTGCT CACGACGCGG CGCATCTTAC TACAATTGCC GACGTGGAGC TCAGGCTAAT CCTTACTCTC GTGGTTGTAG CGCCATTACT CGTTGCAGGC GATAATCTCT CTCTTTCTCT CTATGTGTAC TTCAAAATTT TTACTCTCAA TTCTTTTGTT TTAATCTTAT ACAATTTTTC AGATTATTAT TT 
Length492
Protein Sequence
Protein Residue
Map Locationscaffold_7: 11805238.. 11805724
Download Sequence
A.thaliana
AGI-codeAT4G15800.1
Descriptionralf-like 33
TAIR curator summaryMember of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide.
Alias[RALFL33][ralf-like 33]
Gene coexpression
MR
MR Locus Description
9.53939 Ahg476133 glucosyl transferase family 8
11.4891 Ahg479890 Leucine-rich repeat protein kinase family protein
11.9164 Ahg473657 Phosphate-responsive 1 family protein
19.105 Ahg497051 Leucine-rich repeat (LRR) family protein
19.4422 Ahg950444 Xyloglucan endotransglucosylase/hydrolase family protein
24.2487 Ahg934076 tubulin beta-9 chain
25.4558 Ahg919773 Protein of unknown function (DUF1005)
36.7423 Ahg918858 3-ketoacyl-CoA synthase 1
53.2729 Ahg485641 alpha carbonic anhydrase 1
54.111 Ahg920058 Glycosyl hydrolases family 32 protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression