Detail



ID : Ahg918858

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|918858|scaffold_100139.1
Sequence
TTTCGACCCA AAACTATACT GATGGAGAGA ACAAACAGCA TTGAGATGGA TCGAGAGAGA TTAACGGCGG AGATGGCGTT TCGAGATTCA TCATCGGCCG TCATAAGAAT CCGGAGACGT TTGCCGGATT TGTTAACGTC CGTTAAGCTC AAATACGTGA AGCTTGGTCT TCACAACTCT TGCAACCTCA CCACCATTCT CTTCTTTCTA ATTATTCTTC CCTTAACCGG AACCGTGCTG GTTCAGCTAA CCGGTCTAAC GTTCGATACG TTCTCTGAGC TTTGGTCTAA CCAGGCGGTT CAACTCGACA CGGCGACGAG ACTCACCTGC TTGGTTTTCC TCTGCTTCGT TTTGACCCTC TACGTGGCCA ACCGGACTAA ACCGGTTTAC CTAGTGGATT TCTCTTGCTA CAAACCGGAA GACGAGCGTA AAATATCGGT AGATTCGTTC TTGACGATGA CGGAGGAAAA TGGATCGTTC ACCGATGACA CGGTTCAGTT CCAGCAAAGA ATCTCGAACC GGGCCGGTTT AGGAGACGAG ACTTATCTAC CACGTGGCAT CACCTCAAAA CCCCCGAAGC TAAATATGTC AGAGGCACGT GCCGAAGCTG AAGCCGTTAT GTTCGGAGCC TTAGATTCCC TCTTCGAGAA AACCGGAATT AAACCGGCCG AAGTTGGAAT CTTGATAGTA AACTGCAGCT TATTCAATCC GACGCCGTCT CTATCAGCGA TGATCGTGAA CCATTACAAG ATGAGAGAAG ACATCAAAAG CTACAACCTC GGAGGAATGG GTTGCTCTGC CGGATTAATC TCAATCGATC TCGCAAACAA CCTCCTCAAA GCAAACCCTA ATTCTTACGC TGTCGTGGTA AGCACGGAAA ACATAACCCT AAACTGGTAC TTCGGAAATG ACCGATCAAT GCTCCTCTGC AACTGCATCT TCCGAATGGG CGGAGCTGCG ATTCTCCTTT CTAACCGCCG ACAAGACCGG AAGAAGTCAA AGTACTCGCT GGTCAACGTC GTTCGAACGC ATAAAGGATC AGACGACAAG AACTACAATT GCGTGTACCA GAAGGAAGAC GAGAGAGGAA CAATCGGTGT CTCTTTAGCT CGAGAGCTCA TGTCTGTTGC CGGAGACGCT CTGAAAACAA ACATCACGAC TTTAGGACCG ATGGTTCTCC CATTGTCGGA ACAGTTGATG TTCTTGATTT CATTGGTCAA AAGGAAGATG TTCAAGCTAA AAGTGAAACC GTATATTCCG GATTTCAAGC TAGCTTTCGA GCATTTCTGT ATTCACGCAG GAGGTAGAGC GGTTCTAGAC GAAGTGCAGA AGAATCTTGA TCTCAAAGAT TGGCACATGG AACCTTCTAG AATGACTTTG CACCGGTTTG GTAACACTTC GAGTAGCTCG CTTTGGTATG AGATGGCTTA TACGGAAGCT AAGGGTCGGG TTAAAGCCGG TGATCGACTT TGGCAGATTG CGTTTGGATC GGGTTTCAAG TGTAATAGTG CGGTTTGGAA AGCGTTACGA CCAGTTTCGA CGGAGGAGAT GACTGGTAAT GCGTGGGCTG GTTCGATTGA TCAATATCCG GTTAAAGTTG TACAATGATT TGTTGAACCG GATAATTA 
Length1628
Protein Sequence
Protein Residue
Map Locationscaffold_1: 441953.. 443580
Download Sequence
A.thaliana
AGI-codeAT1G01120.1
Description3-ketoacyl-CoA synthase 1
TAIR curator summaryEncodes a condensing enzyme KCS1 (3-ketoacyl-CoA synthase 1) which is involved in the critical fatty acid elongation process in wax biosynthesis.
Alias[KCS1][3-ketoacyl-CoA synthase 1]
Gene coexpression
MR
MR Locus Description
3 Ahg470802 3-ketoacyl-CoA synthase 3
6.85565 Ahg943721 cytochrome P450, family 86, subfamily A, polypeptide 2
7.4162 Ahg495876 Fatty acid hydroxylase superfamily
7.48331 Ahg471997 white-brown complex homolog protein 11
16.5227 Ahg933864 beta glucosidase 33
16.6132 Ahg900167 3-ketoacyl-CoA synthase 10
18.2209 Ahg950444 Xyloglucan endotransglucosylase/hydrolase family protein
18.3303 Ahg323400 Major facilitator superfamily protein
20.6155 Ahg492450 Protein of unknown function, DUF538
23.4521 Ahg491708 UDP-D-glucuronate 4-epimerase 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression