Detail


ID : Ahg493416

Blast(Query):  A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|493416|fgenesh2_kg.7__2849__AT4G14800.1
Sequence
CAAGTCGCTT TGATCTAAGA AACTCTTACA TTCTCCAGCG ACCGGAAGAG AACTGAGAAG AAACAGATCT GAAGATGGAG TGTGTATTTG GTCTAGTTGG GAATGGATTC GCTATCGTGG CGGCGGATAC ATCAGCAGTT CACAGTATTC TTCTTCACAA GAACAAGGAG GACAAGATCA TGGTTCTTGA CTCTCACAAG CTCGTCGCCG CTAGTGGCGA GCCTGGTGAT CGGGTTCAGT TTACGGAGTA TGTTCAGAAG AATGTGTCAC TGTATCAGTT TCGTAATGGG CTCCCTTTGA CTACTGCTGC TGCTGCTAAC TTCACTCGTG GAGAGCTCGC TACTGCTTTG AGAAAGAATC CGTATTCGGT GAACATCCTG ATGGCTGGAT ACGACAAAGA AGCCGGGGCA TCTCTATACT ACATTGACTA CATTGCAACT CTCCACAAGG TTGATAAGGG AGCTTTCGGT TACGGCTCAT ACTTCTCTCT CTCTACAATG GACAGACACT ACCGCAGCGA CATGTCTGTT GAAGAAGCCA TTGAATTGGT CGACAAATGC ATACTCGAGA TCAGGTCAAG GCTGGTCATT GCACCACCAA ACTTTGTGAT CAAGATTGTC GACAAGGATG GAGCCCGTGA GTACGATTGG CGTATCACCA CTGCTGATGC CTGAGTTGTT TTTTATGTTA CTCAGCTCAC ATTTACTTCT CTATTGAACT ACATGCTCCC TGGATGTTAA AGTTCCTAGA TAATGATGAT ATGCATGTGT TGAACTTTTT CTTCTATTTC CTTATAGCGT CTATGAAGCA AAAG
Length814
Protein Sequence
Protein Residue
Map Locationscaffold_7: 12677101.. 12678938
Download Sequence
A.thaliana
AGI-codeAT3G22630.1
Description20S proteasome beta subunit D1
TAIR curator summaryEncodes 20S proteasome beta subunit PBD1 (PBD1).
Alias[PBD1][PRCGB][20S proteasome beta subunit D1]
Gene coexpression
MR
MR Locus Description
5.47723 Ahg473508 ATP-dependent Clp protease
5.65685 Ahg483746 transcription regulatory protein SNF2, putative
7.74597 Ahg941463 E1 C-terminal related 1
12 Ahg923937 regulatory particle triple-A 1A
12.9615 Ahg893964 dicer-like 4
15.4272 Ahg474459 phosphoenolpyruvate carboxylase 1
22.5167 Ahg927353 metacaspase 4
24 Ahg947975 Proteasome maturation factor UMP1
29.6648 Ahg490773 TLD-domain containing nucleolar protein
30.1662 Ahg324433 O-acetylserine (thiol) lyase isoform C
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression