| Annotation |
|---|
| Description | jgi|Araly1|494036|fgenesh2_kg.7__3469__AT5G39510.1 |
| Sequence |
ATCAAATCAA TTCATCGTCG TCTTCCACAA CTTTCTTCAC CGATCGATTT ACCTTCTCCG ACGTACCTCT CCTTCCCCGT TCGTTTATCA GGTCTTAACC TACCTCATGT TTGAAACAAT GAGTGAAGCA TTTGATGGAT ATGAGCGGCA ATACTGTGAG CTCTCTGCGA GTCTTTCAAA GAAGTGTTCC TCTGCTGTTG CGCTTGATGG AGAACAAAAG AAGCAGAAGT TGTCTGAAAT CAAATCTGGC CTGGATAATG CAGAAGTATT GATTAGGAAA ATGGATCTTG AGGCAAGGAG CCTTCCACCA AATCTTAAGT CCAGTCTCCT TATCAAATTA AGAGAATTCA AGTCTGATCT GAACAATTTC AAAACTGAAG TGAAGAGAAT CACATCTGGA CAGTTGAACG CTGCTGCTCG AGATGAGTTG CTAGAAGCTG GTATGGCTGA CACAAAGACG GCTTCAGCTG ATCAAAGATC AAGATTGATG ATGTCAACTG AGCGTCTCGG CCGAACCACT GACAGAGTCA AGGACAGCCG TAGAACAATG ATGGAGACTG AAGAGATCGG TGTTTCAATC CTCCAAGACT TGCACAGTCA GAGACAGTCT CTCCTACGCG CCCACGAAAC GTTGCATGGA GTAGACGATA ACGTTGGAAA AAGCAAGAAG ATATTGACAG GCATGACGAG GAGGATGAAC AAGAACAAAT GGACAATTGG AGCTATTATC ACTGCTTTGA TTGCCGCTAT TATCGTCATC TTGTACTTCA AACTCACCAA GTAAGCCTCT GTAACTAAGT CCGACCAAAT CAAAGAACTG TTGTGTTCGT TTGTGAATCT TTGATTTATC TTCTTTCTTC TTTCTGTGTG AAAATTTGTG TTTGCCACCT TTGTATTCTA AATTTGACTA TACATACATT AAGCAAGTAA AGCTTCGGCC TGTGTCACGT ATATTGTGTA TATTGTTCAT ATCGAATTCA GAACGATACA TGGTTAAACA TTGAGATTAA AAGCCTCAAT TATTTC |
| Length | 1026 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 21725773.. 21727947 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G39510.1 |
| Description | Vesicle transport v-SNARE family protein |
| TAIR curator summary | Encodes a member of SNARE gene family. Homologous with yeast VTI1 and is involved in vesicle transport. Mutant alleles such as sgr4/zig are defective in the shoots response to gravity resulting in a zigzag growth pattern of the stem. Involved in protein trafficking to lytic vacuoles. Can conditionally substitute VTI12 in protein storage vacuole trafficking when plants are devoid of VTI12. |
| Alias | [ATVTI11][ATVTI1A][SGR4][VTI11][VTI1A][ZIG][ZIG1][VESICLE TRANSPORT V-SNARE 11][SHOOT GRAVITROPSIM 4] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 5.19615 |
Ahg929630 | cyclic nucleotide-binding transporter 1 |
| 14.8997 |
Ahg479152 | response regulator 1 |
| 15.8114 |
Ahg328661 | Class I glutamine amidotransferase-like superfamily protein |
| 24.3926 |
Ahg472581 | |
| 25.1992 |
Ahg911475 | histone acetyltransferase of the CBP family 12 |
| 29.95 |
Ahg350108 | |
| 32.249 |
Ahg476142 | Sterile alpha motif (SAM) domain-containing protein |
| 35.9861 |
Ahg476061 | appr-1-p processing enzyme family protein |
| 42.7083 |
Ahg485874 | Sugar isomerase (SIS) family protein |
| 43.1741 |
Ahg937757 | NAC domain containing protein 62 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
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