Detail


ID : Ahg330218

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|330218|fgenesh1_pm.C_scaffold_7002445
Sequence
ATGAGTGAAA GAAACCGAGG CAAGTCGGAG AATTGTTGCA TTTCTCATAA ATTCGTTGCA GCCTCCAAAA ACCCTCATCA AATCGCCGTG ATTCAAGCTT CAGGCTTGAC GGCGAGGAGG ATTAGGTCGG AATCAGCTGA ACCTTTTGTT TACGACGGAG ACAAATGTTT CACGTTCGCC GAGCTTTCTT CATCCATTGA TTCCCTCACC TCTCGTCTCC GTCGTATCCT CAGTGATGAT GATTCTCAAG AGGCTGGTTC AGATGTTGTA TATATGCCAA AGGTAGTGGC TTTATATATG CCACCATCAG TTGAATATAT TATAAGTGTG TTCTCTGTTT TGAGGTGTGG AGAAGCTTTT TTACCTTTAG ATCCTACATG GCCAAGAGAA AGGGTTTTGT CTCTTATTTC CTCTTCAAAT GCTTCTCTTG TTATTGCTTT AGAGAGATCA CATTGGCTTG TGGAAACCAA GGTCTGCCCT GTATTACTGT TTTCAATGGA TGAGAAATTG AGTGAGGAAA CTGGTTGCTC AAGCTTTGTT TGGCCTTGCA AGAAACAGAG GCAGAGAAAA TTTTGTTATC TTATGTATAC TTCAGGATCT ACTGGGAAGC CTAAAGGAGT TTGTGGCACT GAGCAAGGAC TTTTAAATCG CTTCGTGTGG ATGCAAGAGC TCTATCCTGT TGTTGGAGAG CAGCGATCGG CTTTCAAGAC TTCAGTTGGT TTTATTGATC ATCTGCAGGA GTTTCTTGGC CCTATTCTTA ATTCAACCCC CTTAGTCATC CCTCCATTTA CTCTACTCAA AGAGAATATG ACATCCATCA TTGATTTTTT GGAGGTGTAT TCTATCAGCA GACTCCTAGC TGTCCCATCG ATGATCAGAG CTATTCTTCC TACTTTACAA CATCGTGGAC ACAATAAGCT TCAAAGTAGC TTGAAGCTGG TAGTTTTAAG TGGCGAACCC TTTCCCGTGA GCCTGTGGGA TTCACTTCAC AGCCTACTTC CTGAAACATG TTTTCTGAAT CTATATGGGA GTACAGAGGT ATCAGGGGAC TGCACTTATT TCGACTGCAG TGGGTTGCCA AGAATCTTGA AGACCGAGGA GATTGGTAGT GTTCCTATTG GCAAGCCAAT TTCGAATTGC AAAGTGTTAC TTTTTGGGGA CGAAGATAAA CCTTATGAGG GAGAAATATG TGTTGGTGGC CTCTGTATTT CACAAGGGTA CATGCATTCC TCGATAGAGT CTCAAGGCTA CGTGAAGCTA CATAATAATA AATCGCTCTG TAATCATTTA ACGAATGATT GTGGAAGCGA GCTTTATTAT AGAACGGGTG ATTATGGACG ACAGCTTTCT AGTGGTGATT TGATTTTTAT TGGGAGAAGG GATCGAACTG TTAAACTCAA TGGAAAACGC ATGGCCCTTG AAGAGATTGA AACAACTCTA GAACTAAATC CAGATGTTGC TGAAGCTGTT GTTCTACTTA GCAGAGATGA GAAGGAGCTT GCTTCACTTA AGGCCTTTTT AGTACTGAAC AAGGAAAGCA TTTCCGGTGA TGGTATCATA TTTTCTATCA GAAATTGGAT GAGCGAAAAA CTTCCTACGG TGATGATTCC TAACCATTTT CTTTTGGTGG AGTCACTGCC ACTTACTGCA AGTGGAAAAG TTAATTATGA AGCACTAGCA AGGTTGAAAT GTCCTAAAAC CCTTGCTCAA GATATGATGC ATAGCAATGG AACTAATAGT CTACTGCAAA CTATTAAAAA GGCCGTCTGT GATGCATTAG TGGTCAAAGA AGTTTTAGAC GATGATGATT TCTTTGCGAT TGGTGGAGAC TCTTTAGCCG CAGCACATCT TTCTCATAGT CTTGGTATTG ATATGAGATT GATTTACCAA TTTCGAAGTC CATCTAGGCT TTTGATCTGT CTGTCAGAGA AGGAAGGTAA GTTAAGAGAA GATACGCAAC ACAACACCAC TCAGAAACTA GACCACAAGA CAGAGAGTCA GAATGGTAAT GGGTTGGTTA GTAGAACTGT TCCACGTCAT TCTGGTGTTA CATCAAGCCC AACGCCTTCA GGAATGCAGT GTGAGAAGAA TAATTCCCCA AAGCGATTGA AAATTGATTC CAAAATTTTT TCTCCCAAAA CGAAAGAAAA GAAATCATGG GATTCAGGAT TTTCTCAAAC ACAATGTGCA TTCAGTCGGT GCAATAAGGT ATATTCTCCG AACTCATGTA GTAATGAAGA GGCAAACCGA GAAAACTGGT CGGTGGAGAT TCCAAGGAAC CAAATGGTCT CTATGCAAGA GATATGGAAA GTTCATATGG AGTCTTGTGT AGATGCCTCG CCCCTAGTTG TGTTGAAGGA TTCGAAAACT TATCTATTCA TTGGGTCTCA CTCACGTAAA TTTTCGTGCA TTGACGCCAA AAGTGGCTCT ATATATTGGG AGACCACTCT AGAGGGAAGG GTCGAAGGTT CAGCCATGGT TGTTGGTGAT TTTAGTCAGG TCGTTGTTGG ATGCTACAAA GGAAAATTAT ATTTTTTAGA ATTCTCAACT GGAAGCTTAT GTTGGACATT CCAAGCATGT GGCGAGATAA AGTGCCAACC TGTTGTGGAT GCATCTTCGC AACTGATATG GTGCGGATCA CATGACCACA CTCTTTATGC CCTTGACTAT AGGAGTCAAC GTTGTGTTTA TAAGCTGCAA TGTGGTGGGA GCATATTTGC TTCACCTTTA ATTGATGAGG GTCATAGTTT ACTATATGTG GCTTCTACAA GTGGTCACGT GACAGCTGTA TCAATAGAGG ATTTGCCATT CCACACCTTG TGGCTACTTG ATCTAGAAGC ACCGATTTTT GGTTCCCTAA GCATTACCCC GACAAGCCGA AGCGTTGATG GCCAAGTTAT CGCAATGAGT ACGTCTGGAA CTATTATTTG GAGGTATAGG ACTGGTGGAC CAATATTTGC TGGGCCTTGC ATGTCACATG TGCTTCCTTC TCAGGTGCTT GTGTGCTGTA GAAATGGAAG TGTTTATTCA CTAGAACCGG AATCTGGGTG TCTTGTGTGG GAATACAATA TTGGGGACCC GATCACAGCA TCTGCATACA TTGATGAGAA TCTGCATTTT GAATCGCATC AACTGCTTGC ATCAGACAGG TTGGTGACTG TAAGCTCGAG CTCAGGAAAA GTTCATGTCC TTCGTGTGAG AACCAACCAC AGCAGAGATT CGCATGACTC AAAAGTAGGA GAAATCGCGA GGCTGGAGTT GCAGGCAGAC ATTTTCTCTT CACCAGTGAT GATCGGTGGC CGGATATTTG TTGGCTGTCG TGACGACTAT GTGCATTGCC TCTCTCTTGA GAGTTGCAGG TAA
Length3363
Protein Sequence
Protein Residue
Map Locationscaffold_7: 17844099.. 17851304
Download Sequence
A.thaliana
AGI-codeAT5G35930.1
DescriptionAMP-dependent synthetase and ligase family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3 Ahg328660 cyclic nucleotide gated channel 9
6.16441 Ahg494356 ornithine-delta-aminotransferase
11.3137 Ahg358554
16.2481 Ahg937206 Concanavalin A-like lectin protein kinase family protein
22.9565 Ahg332601 HIT-type Zinc finger family protein
30.0998 Ahg943674 transducin family protein / WD-40 repeat family protein
31.749 Ahg942709 SPla/RYanodine receptor (SPRY) domain-containing protein
32.1714 Ahg947658 Ataxia telangiectasia-mutated and RAD3-related
32.4808 Ahg485847 SNF2 domain-containing protein / helicase domain-containing protein / F-box family protein
33.6303 Ahg899624 natural resistance-associated macrophage protein 3
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression