Detail



ID : Ahg492392

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|492392|fgenesh2_kg.7__1825__AT4G24510.1
Sequence
AAACACCCAA ATCCCACCTA CATTTAATGT TGTCGTCACC GAAACTGTTG TCTCAACTGT CCTAAACCAG TGATACCCAT AACTATTCTG AACTCAACTT TCTTTCCAAA CTCAATTCTT ATATAACACA TCCCATTTAA GCCTATAAGC TACACATATC AGCTCCCTCA GAAAGAAAAA ATGGAGAGAA GCCCAGTGAC CAGTGCCAGG CTCTCTTCGG TGGTGCCTGC TTCTGTGGTA GGCGAGAACA AGCCACGACT GTTCACACCC ATGGACTTAG CCATGAAGCT CCACTACGTC CGAGCTGTCT ACTTCTTCAA GGGTATACGT GACTTCACTG TCGCCGAATT GAAGAACACC ATGTTTACTC TACTCCAGTC TTATCACCAC GTCTCAGGTC GGATCCGGAT GTCCGACAAC GATCCTTCAG CTCCTGCCAT ACCTTACATT CGCTGCAACG ACAGTGGCAT GCGCATCGTC GAGGCCAACG TCGAAGAGTT CACAGTGGAG AAGTGGCTCG ACTTGGACGA CCGTTCCATT GACCACCGGT TCCTTGTCTA CGATCACGTT CTTGGTCCTG ATCTTACCTT CTCTCCACTT GTTTTCGTCC AGATAACTCA GTTTAAATGT GGTGGTCTCT CTATTGGGTT GAGTTGGGCC CATGTTCTAG GAGATTTATT TTCAGCAGCA ACTTTCATGA AAACACTTGG ACAGCTGATG TCAGGTCATG GCCCAACAAA ACTGGTTTAC CCGGAAACCC CTGAACTGAC CTCTCATGCT CATAATGGTG AAGCTATTTC CATTGAAAAG ATAGAATCGG TTGGTCAGTA TTGGTTACTT ACAAATAAAT GCAAGATGGG AAGATACATT TTTAATTTTA GCCTCAACCA AATTGATCGT TTGATGGCCA AGTACACCAC ACGAGACCAA CCTTTCTCGG AGGTTGATAT TTTGTATGCA TTGATATGGA AGGCCCTACT GAATATCCGC GGCAAAACAA ACACAAATGT TATAACAATT TGTGACCGTA AAAAATCTTC AACCTGTTGG AATGACGACT TGGTAATAAG CATAGTGGAA AAGAATGACG AAATGATTGG GATATCCGAA CTAGCTGCCC TGATCGCGGG TGAAAAAAGA GAAGAAAACG GTGTGATCAA GAGGATAATA GAAGAAGATA AAGGGTCTTC AGATTTTATC ACGTACGGTG CAAATTTAAC GTTTGTGAAT CTTGACATGA TAGATATGTA TGAAATTGAG ATCAAAGGGG GGAAGCCAGA TTTCGTAAAC TACACGATTC ATGGGGTTGG GGACAAAGGT GTTGTTTTGG TTTATCCCAA GCAAAACTTT GCAAGGATTG TAAGTGTAGT GATGCCTGAA GAAGACCTTG CAAAACTCAA GGAGGAGGTG ACTAATATGA TTATGTAACT TTGTTGTATC TTGTTCTTGT 
Length1450
Protein Sequence
Protein Residue
Map Locationscaffold_7: 7034402.. 7036196
Download Sequence
A.thaliana
AGI-codeAT4G24510.1
DescriptionHXXXD-type acyl-transferase family protein
TAIR curator summaryInvolved in C28 to C30 fatty acid elongation.
Alias[CER2][VC-2][VC2][ECERIFERUM 2]
Gene coexpression
MR
MR Locus Description
12.2066 Ahg485226 HXXXD-type acyl-transferase family protein
13.4907 Ahg918799 cytochrome P450, family 86, subfamily A, polypeptide 4
19.8997 Ahg470802 3-ketoacyl-CoA synthase 3
20.8567 Ahg473363 ATP-binding cassette 14
21.3542 Ahg478619 Leucine-rich repeat (LRR) family protein
26.4953 Ahg472828 3-ketoacyl-CoA synthase 5
28.9828 Ahg938903 isopropylmalate isomerase 1
32.8634 Ahg493531 HXXXD-type acyl-transferase family protein
37.3497 Ahg494545 FAD-binding Berberine family protein
39.8999 Ahg918858 3-ketoacyl-CoA synthase 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression