| Annotation |
|---|
| Description | jgi|Araly1|935176|scaffold_403164.1 |
| Sequence |
TCTCTCTCTC TCTCTCTCCT TCAATGGAAG AAACTTTAGC CACTCCCGAC ACCACGAGAC GCTCTCTGTC ACCGTCGTGC TCAGCCGCCG TGAAATCACG CGCCGCTGGT TTCGAGCGCA GAACCAAACG GAGATTGTCA GAGACTAACG CAAGCGTACG TGAAGACCGG GAAGAAGAAG AAGAAGAAGA CGAGGTAAAG GAAAAGATTG AGGCGTTGCA GAGGATTATC CCCGGAGGAA CGGCGCTTGG TGTGGACGCG CTCTTCGAAG AGACAGCTGG TTACATTATG TCTCTACAAT GTCAGATCAA AACCATTAAA GTTCTTACTT CGTTTCTCCA ACGCGTAGAT CAAGAAGACA TGAAGTTCGG AGGTTGAAGA TGACCACACC AAGATTC |
| Length | 397 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_4: 19920068.. 19920443 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G42870.1 |
| Description | phy rapidly regulated 1 |
| TAIR curator summary | Encodes PHYTOCHROME RAPIDLY REGULATED1 (PAR1), an atypical basic helix-loop-helix (bHLP) protein. Closely related to PAR2 (At3g58850). Up regulated after simulated shade perception. Acts in the nucleus to control plant development and as a negative regulator of shade avoidance response. Functions as transcriptional repressor of auxin-responsive genes SAUR15 (AT4G38850) and SAUR68 (AT1G29510). |
| Alias | [HLH1][PAR1][HELIX-LOOP-HELIX 1][PHY RAPIDLY REGULATED 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 11.4018 |
Ahg470654 | Fatty acid desaturase family protein |
| 11.8743 |
Ahg494567 | Zinc finger C-x8-C-x5-C-x3-H type family protein |
| 14.4222 |
Ahg350051 | glucan endo-1,3-beta-glucosidase-like protein 3 |
| 24.1868 |
Ahg479888 | xyloglucan endotransglucosylase/hydrolase 16 |
| 27.8568 |
Ahg945946 | SKU5 similar 4 |
| 30.2159 |
Ahg486262 | Basic-leucine zipper (bZIP) transcription factor family protein |
| 31.1127 |
Ahg482579 | ovate family protein 15 |
| 31.749 |
Ahg471076 | Eukaryotic aspartyl protease family protein |
| 37.2156 |
Ahg480375 | arabinogalactan protein 9 |
| 37.4967 |
Ahg933489 | TRICHOME BIREFRINGENCE-LIKE 45 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
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| The four seasons |
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| Growth Chamber expression |
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