| Annotation |
|---|
| Description | jgi|Araly1|494645|fgenesh2_kg.8__461__AT5G43560.2 |
| Sequence |
TTTTTCTTCT TCCTTACGAC CTCTCCATTT CTCTCTCTTC CGTCTCTTTT TTTTTTTTGT TCTCTCTAGA ATCTTGAAGA GAGCGAGCTT CCATTAAAAT CTCATTCTAA CGATTTTGAA GCTTTTTCTT CAACCATCTC CAGGGGAATG TCTGAGAGTA CTAATGAAGA TTGTGGAGCA GGAAGATCAT CAGTGGATGA GAATTCAAAT GGACAAAGAA GTCAATCAGA AGAAGTACTA GCGGAATGGC GGTCGTCTGA TCAAGTGGAG AATGGAACTC CTTCAACATC GCCACCGTAT TGGGACATCG ATGATGATGA CGACGATTTT GGATCAAAAC CATCTGAACT ATTTGGGAAA AATACTTGGA CGATTGAGAA ATTTTCAGAA ATTAACAAAC GGGAGCTCCG TGGCGATGTT TTTGAAGTTG GGGGCTACAA ATGGTATATA TTAATTTATC CACAAGGGTG TGATGTTTGC AACCATCTCT CTTTGTTTCT CTGTGTTGCA CACCATGAAA AACTTCTTCC AGGCTGGAGT CATTTTGCTC AGTTTACTAT AGCTGTGTCG AATAAAGATC CAAAGAAATC AAAGCATTCA GATACGTTAC ACCGGTTTTG GAAAAAAGAA CATGATTGGG GATGGAAAAA GTTTATTGAG TCACCTAAAT TAAAGGAAGG GTTCATAGAT GATTATGATT GTCTTACAAT TAAGGCTCAA GTCCAGGTGA TCAGAGAGAG GGTGGACCGA CCTTTTCGCT GCCTTCATTA TAAGTATAGG GAGGAACTTG TTCGGGTGTA TTTGACAAAT GTAGAGCAAA TTTGCTGGCG GTTTGTGGAA GAGAAAAGAA GCAAGCTTGG TAGGTTGATA GAGGACAAGG CAAAATGGAA AAGCTTCTGT GCTTTCTGGA TGGGGTTGGA CCAAAATTCA AGGCGTCGAA TGTCCCGAGA GAAAATGGAT GTGATTCTAA AAATAGTTGT AAAACAATTC TTCATTGAGA AGGAAGTTAC ATCTACTTTG GTGATGGATT CCTTGTATAG TGGGTTGAAG GCTCTTGAAG GCCAAATTAA GAACAAGAAA ACTAGGCCGA GACTAATGGA TACTGAAGAA TTGCCAGCTC CAATTGTTAG TGTGGACAAA GATACGTTTG CATTAGTTGA TGATGTGTTA TTACTCTTAG AGAGGGCTGC TGTGGAGCCA TTGCCTACAA AAGAGGAAAA AAGTCCCCAA AACCGCACGA AGGATGGGAA TGCTGGAGAG GAATTCAGTA GAGAAGCCAT TGAGCGTGAT GAGAGGCGTT TAACTGAGTT GGGTAGACGG ACTGTGGAGA TATTTGTTCT TGCACATATC TTCAGCAACA AAATTGAAGT TGCATACCAA GAAGCTATTG CATGGAAACG GCAAGAAGAA CTTATTCGTG AAGAGGAGGA AGCGTGGCTG GCAGAAAGCG AACAGAAGGC CAAAAGAGGA CCATCCGAAA AAGAGAAGAA ATCTAAGAAG AAACAGGCGA AACAGAAAAA GAACAAAAAC AAAGGAAAGG AAAAAAAGAA AGAAGAGAAG GTGAAAACCC AAACAGAAGA AAGGGATATT GAGAAAGAGG AATGTGTGAG AGCGAAAGCA GAATCGTCAG CTGAAAAACC TGACACACTT GGAGATGTCT CTGACCTTTC TGATTCAGTA GATAGTTCAG CTGAAATACT TCAGCTTGAT TCAGAAGATA GAGAGAGTAG TCCTGTTCAT TGGGAAATAG ATGCCTCAGA GATTAATCCT CTTTCTTCAG GAGACACTAG CAGAGGAAGA GGCAATTCCT TATGTATACC TAATGGAGTT GCAGCAGAAA GAAAAGGTCT GTCCACAATG GATGATAGTT CTTCAACCTG TTCTAATGAC TTGATAAGAT CAGGGGTAGC CAATGGGTCA TACAAAGGGA ATGTAGTAAA TTGCCAAAGC CAGAAGTGGC ATATCAATGG AAAAACACAA CCAGGAAAAG TATCTGATGC CAGCAGTTTA GCCAGTGAAA AAGAGGATCA ACCTTCAAGA CCTGCGTCTG ACCCTAAAAA TCAGAGCCAT TCTTCTGAGA AACGCAGAGT TGGTGAAGCT GATGCGGTTA TCTCCCACAT TCAAAAACCA GAGAGCCCGG GGGAACGTAG TCCTGTTAGC AAGGATCCCA ACATGATTCA GATGAAAGAG AAAACTGCTG CGGTACTTTC CCCATCCAGA GCTGCTCCTT GGAATCCTCC ATCTCTAGTG CAAGCAAAAC CGGAGAAAAC GGTTGTTTCA AATGTAGATG CTGTTCCAAA CAGGAAAGTA GCATCTGCTA GATCACCTTC ATCAGATCAA GCATCACCAT CTCGTGAGAC TAAGTTGCAA ACTGTGGGTC TTAGAGCTGA TATACAGAAA ACCGTTTCTC CAAAACCGGT GGCACAACCA GCACCTTCTA TCTCAAGGCC TTTGAGTGCT CCTATAATCC CCCCAAAGCA AGCTGCACCT GTAATATCTG CTGTTCAAAC AACCTCGGCT GCGTCCCTTG CTCGTTCAAT GAGCTCAACA GGCCGTTTAG GTTCACCGAT ACATAGCCAA GCTTACAATC CTCAATCCTA TAAACATGCC ATAGTGGGAT CATCTGGTTT CACCCACTCA AGCACTCAAT CAACGGGAAC AAGCACATTG CCGCCTTATT CACATCCGTC TCCTATCTCA GTATCAAGTC AGTCTGGTTT CCCTATCAAT GTTGGCTCTT GGGATGTTTC TTCTGGTGGG CTCTTGTGGA CCGGTGGTTC GAGTTCAAAC AGAGATACAA CAACAACCAT CAGCGGGAAT CATAAAACGA ACACTTACAA CACCCCCGTA GTAACTACCA GCATCAGGCC TACTAATGTC CAGATTGGGA GAACGGCGCA GATGACCGAT GAGTTCCCTC ACCTTGATAT CATCAATGAT CTGCTTGAAG ACGAACACGG TTCAATGGAC AGTAGTGTAT ACCATGTACC ACAACAGTTC AACAACCAGT ACTCATACCA TGGTGGTGCT GATCTCGGGA TCTCTGGCAG GTCTAGGAGT TACAGTGATG ATGGATTTCA CCAGTCTTAC GGTGAATACA TGCCACATTC TGGTTCTTCT TCGCCATATG GTAATGGACA AACACAATCG CAATGGCAGA TGGCAATGGA CTTGTCTTTA CGGGCTATGA GGAACCAAGA CGATGCATCA GCATCAGCTA CTTACTCTTA CTTTGATTTA GATTCATCAA ACCCGAACTT GTCTGGAATC AACGGCTATA GAGACTTCAG GCCATCGAAC GGACACTGAA TAGCTTTGGG TTTAAGGAGT GGCATTGCAT TGTAATGTTT ATTATATAAA GATGGAAAGC AAAAAACATT TGTGTAAAGA GAGTTTTCGT CCTCTTCGTT TCAAATGAAT CTTTTTTT |
| Length | 3428 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 3886131.. 3891476 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G43560.1 |
| Description | TRAF-like superfamily protein |
| TAIR curator summary | |
| Alias | |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 4.79583 |
Ahg896860 | glycine-rich protein |
| 9.64365 |
Ahg908052 | |
| 13.4164 |
Ahg487865 | RNA-binding (RRM/RBD/RNP motifs) family protein |
| 13.7477 |
Ahg344464 | Structural maintenance of chromosomes (SMC) family protein |
| 15.3623 |
Ahg487152 | Protein kinase superfamily protein |
| 20.2978 |
Ahg928970 | cystatin B |
| 21.095 |
Ahg487092 | RING/U-box superfamily protein |
| 23.3666 |
Ahg946015 | proline-rich spliceosome-associated (PSP) family protein |
| 29.3939 |
Ahg472216 | ATPase, F0/V0 complex, subunit C protein |
| 32.8634 |
Ahg918566 | RADIATION SENSITIVE 17 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|