Detail



ID : Ahg487092

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|487092|fgenesh2_kg.6__226__AT5G03200.1
Sequence
ACTCCCCTTT CCCAATGATC ATAATATCAA CTGAATCACG AAAAACCTCA CCTTTTTTCT TTTCCCGATC ATGGGGAATC TGATCAGTCT GATCTTCTGC TGCGGGAGAA GGCGGAGGAG CAATATTCCT CCGGCGATGG AAACGGCTCC TCTTGAACTC CCAGCGAATA GATTTGTATT CGCCGCGGCA CCGCCGTATC TGAACCCTAA CCCTAACTAC TTTGATCAGT ATCCAGGTTA CTGCCTTCCT CCGCCGCTGC CGCAGCCGCT GCCTTACAGT CTCCACCACT TACATCAATA TCCTCCCCAC AGTTACCAAC TACCTCATCC TTTGATTCCC GGCGGTAGAC ACCCGATGCT ACCGCCTCCG TACGTCCATG AGAAAGCCGT CACGATTCGT AACGATGTTA ATCTGAAGAA GGAGACTTTA AGGCTCATAC CCGACCCGGA GAATCCGAAT CGACTTCTTG TCTCCTTCAC ATTTGATGCA GCCATGCCCG GAAGGATCAC AGTTGTTTTC TTTGCTACAG AAGAAGAAGA AGGCAATCTT AGAGCAACAA AGGAAGATAC TTTGCCTCCA ATCACTTTTG ATTTCGGAAA AGGACTTGGT CAGAAGTTCA TACAACCATC TGGAACGGGT ATTGACCTGA CGGCATTTGC AGATTCCGAG CTATTCAAGG GGGTGGATAC AGATGTCTTC CCGTTGGCGA TTAAGGCGGA GGCAACTCCA GCGGAAGAAG GAAAGTCGGG TTCCATGAAT GGGCAGATTA CTCAAGTGGT GTATACCAAG GAGAAAGGAG AGATTAAGAT AGAAGTGGTG AAGCAGATAC TATGGGTGAA TAGGATGAGA TATGAGTTGC GGGAGATTTA TGGGATTGAG AACACGGTTG ATGGTTGCGA CGAGGGAAAG GAATGTGTTG TATGCTTGTC TGAACCACGC GATACAACTG TTCTTCCTTG CAGACACATG TGTATGTGCA GCGGGTGCGC AAAAGCGTTA AGGTTTCAGA CACATCTGTG TCCAGTTTGC AGACAACCTG TAGAGAGGCT TTTGGAGATT ACGGTAGACG GAAACAAGAA AGGTGGAAAT GGAGATGGAG ATTAACAAAT TTAGTTAAGC AATAGACTTG TGTAATATAA GCCATGCTTA ATTAAGACAT AAAATGTTAT GGTTCAATAT ATATATCAAT TGGAAACTGA GTTCTTAATT AG 
Length1212
Protein Sequence
Protein Residue
Map Locationscaffold_6: 856458.. 857921
Download Sequence
A.thaliana
AGI-codeAT5G03200.1
DescriptionRING/U-box superfamily protein
TAIR curator summary
Alias[LUL1][LOG2-LIKE UBIQUITIN LIGASE1]
Gene coexpression
MR
MR Locus Description
8 Ahg474716 dehydrin family protein
8.48528 Ahg487051
8.83176 Ahg488536 SART-1 family
11.3137 Ahg942557 isoamylase 3
12.0416 Ahg474663 CBS domain-containing protein / transporter associated domain-containing protein
12.8452 Ahg490899 Integrase-type DNA-binding superfamily protein
14.6629 Ahg492278 arginine/serine-rich splicing factor 35
19.7484 Ahg940935 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
21.095 Ahg494645 TRAF-like superfamily protein
22.4499 Ahg479734 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression