| Annotation |
|---|
| Description | jgi|Araly1|494672|fgenesh2_kg.8__488__AT5G43310.1 |
| Sequence |
ATGAAATCTT CGACTCGGCT TGACTCAGTT GCTTTTCAGC TCACTCCCAC TCGAACCCGG TGCGATTTGT TGGTAACAGC TAATGGAAAG ACTGAGAAAA TAGCTACAGG ATTACTTGAT CCTTTTCTTG CCCACTTAAA GACTGCAAAA GATCAATTAG AAAAAGGTGG TTACTCAATT ATTCTCAAGC CTGAAGCTAG TGATAATGCA GCCTGGTTCA CTAAAGGAAC AATTGAAAGG TTTGTTCGAT TTAAACTGAG ATCATTCAGA TTAAGGAAGC CATTGTATAT TGGGATTTTT GAATACTTTG TTTGGTGTAT GGTCAGAACT CAAAAAGACG ATCAGCGAGC AAAAAAAGCA GATAGTACAG AAGGTAGCAG GCCTTTGCTA CAGCTCAACG AGGAGAAAGC TATTGTCCTT TACGAGCCTG ATTCACATCC AAAGCAAGCA AATCGGTCTA CCTCATCAGA TGAAAACTCT AAGTATACCC CTTTGCATGA AAAATATTTG TTTTCTTTGT TTTTATCAAA GAGAGTCGTC AAATATCTAA TCGTTATGAA AGTTCTGGAG ACACGGAAGA TAATGTTGCA GAAAGAACAA GGAATGGCCT TTGCACGTGC TGTGGCAGCT GGTTTTGAGG CTGATGATAT GATCCCTCTA ATATCTTTTG CCAAAACTTT TGGAGCTACT CGTTTGATGG ATGCGTGTTT GAAATTTGTG GACTTGTGGA AGAAAAAGCA CGAAACTGGC CAGTGGGTTG AAATTGAAGC AACAGAATTA ATAGCAACAC ATCCAAATAT CTCTGCAATG AACGACTCAG GGATTATGTT TGCAAATGCT GCTAATATGC CTGGGACACC TGAAAATAGT GATGTGAAGT CTCCTTCAGA TAATAAACCA AATGGAAATC AAGAATATGT GCAAGGGCAA CATCCGCAGC CGATGTATGC ACCCTGGCCA GTTCACTCTC CACCGGGTAC CTTTCCTGTA TTTCAAGGAT ATACGATGCA GGGCATGCCG TACTACCCGG GCTATCCAGG AGCTAGTCCA TATCCATCTC CCTATCCATC TACCGATGAT TCTAGACGTA GTTCTGGCCA AAGAAAGGCT CGGAAACATC ATTCATCTTG TAGCGAGGAC TCCGAATCAG AAGATCAGGA AAGAGAAATT GAAAAATCAG GTAGAAGAAG AAAATCGGGG AAGGTGGTGA TTCGGAATAT AAATTACATT AATTCAAAGA AGCAAGATCA TTCAGGAACA GAATCTGATG CTGATGACCT TCATGAAGAA GGAGCAAGAG AATGTTACAA TGGTAAAGAG AGAGCAATAG AAGGAAAAGA AGCTGACACT GGGGATTGGC AGGCCTTTCA GACTTATTTA TTGCAAGATG CCGATAGAGA TGAACGTACC ATTGACCATA TGATGGAAAA GGAGATTACA AGGAAGAAGA GGCAAAGTAC AGGGAAGTAT GATCCTTTAG CACATGATGA ACGTGAATCA GGAAAATATC AAGAAAGGGA TACAGCTGAT ATTCGGAATG GAAGTGTGAC TCGTAGAATC AGGGGATCTA GTGACTCTTT CATGGTTCAC CAGAGAGAAA ATGGTTTTGT GAATTCTTCT GATCCTCTCA ACTTAGGATT TGATAATCCA AGGAATGGTC TGGATAAGAG ATCTTCATTT AACATGGATG ATGATTCTTA TATCGTTACT CGGGGTTCTG CACCACTAGA TGAAGCTGGA AGAAATAAGA GAAATGCTAT GGACATCGGA TCAGAGATCT CTCCATGCCA CCAAACTGAT GGAAATGAAA GAAAGCAGGT CAATTATGAG CCTCATGATC TGAGTCTGAT ACCAGAACGG GAAACAGAGA AGTTATCAGC TGGGTATGAT CCTGCACTAG AGTTTGGATC CAAAGCTTTA AAGAAGAATA ACCAGGCAGC CGGAGGTGCT AAGAAGTTAG TGAAAGATCC AAAATCAAGA CTTTCTAAAG ATGCTGCAGA TAAGAGGAAG GCTCCGGGCC CAATACGGAA AGGAAGACCG ACAAAGATGA GTCCTTTAGA TGAAGCAAGA GCACGTGCTG ATAAGCTTAG AAATTTCAAA GCTGACCTCC AGAAAATGAA AAAGGAGAAG GAAGAGGAAG AGAGGAAGCG CATCGAAGGT CTGAAAATAG AAAGGCAGAA GCGGATTGCT TCTAAAAGCA ACTCAGCTGT AGGTCAGTCA CAGTTGCCTG CACAACAAAC AAAAAAACAA ATTCTAAACA AGTTTTCTCC CGGCGCTCCT CGAGCCTCTA AGTTTAGTGA CTCAGAACCA GGATCATTAT CACCTCTTCA ACGTCTTTCC AGAAGAACTG CTTCTTTAGG GTCAAATGAC TATCAGAAAT TCCCCAAGAA TGGTAAATTG AGTACCGTAA GTAAGTCAAC AGGAAATATG CTAACAAGGT CGATATCACC GTTACCTCCA TCTAAGAGAG AAAGCATAGC AACAGGAAAT AGGCTAACCA GGTCGATTTC ACCATTACCT CTGTCTAAGA GGGAAACCAG AGTTAGTCTA GATACGCAGA ACAAGTCGGT TTCAAGGACA AGACGATTAT CAGAACCAAA AATGGGTAAC AATAGTGCAC CAAGTTCGTC AGTGAGGCCA CGGCGCACAA TAGCATCAAG AAAAGCATCT GACGCTCCTG AGATAAAGAA ACTATCTGCC ATTGTTAACT ATGATATAGC GAAAATTGCA TCTCTTCCGG AACTGAAGAT AAAACCAGCC AAAGGTCCTA CTAATGTTAT GGTGAAAGGG GTCGAGAAAC TCAAATCTTC AGCTTCTGAG ATTCAACCAA GTGGTAACAA GAACAAATCC TTGTGCCAAA ATGATATTGA AGAAACTCCA GTGATTGAGA AGACAGTAGT GATGGTGTTG CCAAGCTCAG CTCGAAGTAT AAGTACAGAT CAGGTGAAAC ACGAGAAGTC TGATGTACTC TCTGAAAACA CCACCATCCG TCAAGTAGTT GATAAGGAAG CCTTTGAAAC AATGCAGGAG AGTGGCAGTG ATCTAGTCTT AGTTAGATTG GAGACTCTGA GTGACTTAGT AACAGAAACA CCAAAGTTTC TGACAAGTCA AAGTATCGTT GCGAAACCAT ATGAAGCTCC ATATGCTCGG GTTTCTTCGT TAGAAGATCC ATGTACAGTG TACTCAGACT GTTCCCAAGC ACCTCCACCA AGCTTATATT CAAATGAGAC AGAGCAAGAA ACTGGGAAAG TCCTTGTACC AGAGAAGAAG ATAAGTGAGG CCTTAGAGAA ATCTCAAACA AAAGAGTCGG CGTCAAAAGG GCTTAGAAAA CTGTTGAAAT TTGGAAAAAA GAGTCAGTCT TCTTCCGCAA GTGAACACCA TACCGAGTCT AATAATGCAT CTTTTAATAG CATCGAGGAT CATGAACCAG CTGTCACTGC TGCCACGACA AGTGAAGCTT TTACACTGAA GAACCTCATA TCTCAAGACG AAACACCTAC AGCAGCCGCC GCTTCACAGA AATCTTCTCG CCATTTTTCA ATACTGTCTC CCTTCAAGAA CAAGAAGACA GTATCCTGAG GACACAAAAT ATATAAGCTT TGAAAGCTTG TAGTGACAGA GTATTTATGA TGTATCCAAT ATCATTATAT CAAGCCTCTT CTGCAACAAT GTCAAAACAC TACAATTGAT GCAAA |
| Length | 3695 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 4195723.. 4201683 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G43310.1 |
| Description | COP1-interacting protein-related |
| TAIR curator summary | |
| Alias | |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1.73205 |
Ahg488375 | RNA-binding KH domain-containing protein |
| 3.4641 |
Ahg949533 | Protein of Unknown Function (DUF239) |
| 4.24264 |
Ahg470078 | SEC7-like guanine nucleotide exchange family protein |
| 4.47214 |
Ahg948853 | squamosa promoter binding protein-like 2 |
| 6 |
Ahg496218 | Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein |
| 12.9615 |
Ahg940836 | sterol methyltransferase 1 |
| 13.6748 |
Ahg495353 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| 13.8564 |
Ahg931790 | coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP, putative |
| 15.2315 |
Ahg474507 | STRUBBELIG-receptor family 6 |
| 18.9737 |
Ahg909580 | Aldolase-type TIM barrel family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|