Detail



ID : Ahg495353

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|495353|fgenesh2_kg.8__1169__AT5G52882.1
Sequence
AACCCAAACG TCGCTATAAA TAGAGAGATC CATCTTCTTC TTCTCCATCG TCCACCTTAT AAATCTTTTT TTACCCCCAA AAGAAAAAAA AAAAAGATAT TTCGAGACAA CAAAAAAAGT CTCGATTTTT TCTTCTTTTC CGAGGAATGC TCGTTGAACC CCTCCTAGAT CGTATGATTT AGAATCGAGG GTTTTCTTCT GATTCGTTAA ATCTTTTGTC TTTTGGTGAA AAAATGGAGC AGAAGAGCGT GTTGTTATCA GCTTTAGGAG TTGGTGTTGG GTTAGGGATT GGTTTAGCAT CAGGTCAAAG TTTGGGAAGA TGGGCAAACG GGTCGGGTTC TGTTGAAGAT GGACTCACCG GAGAACAGAT TGAGCAAGAG TTGATGAGAC AAATTGTTGA TGGTAGAGAG AGTACTGTCA CTTTTGATGA GTTTCCGTAT TTCTTAAGCA AGAGAACTCG AGAATTGTTG ACAAGTGCTG CTTATGTTCA TCTAAAAGAG TATGATATAT CGAAGCACAC TCGGAATCTT GCACCTGCGA GTAAAGCTAT TCTTCTTTCT GGTCCTGCGG AGTTTTATCA GCAAATGCTT GCAAAAGCTT TGTCTCATTA CTTTGAATCA AAGCTATTGT TGTTAGATAT AACTGATTTC TCTATTAAGA TACAGAGTAA ATATGGATGC ACCAAGAGAG AACCTTTTCA CAAGAGGTCT ATTTCTGAGT TAACATTAGA CAAAATGTCG AGTTTGATGG GTTCCTTCTC TATGCTTTCT CAACGTGAAG TTGAACCAAG AGGGACATTG CGTCGACACA CCAGTGGAAA TGATCTCAAA TCAAGGAGTA TTGAGAGCTC TAATCGTCCT CCAAGACACA AGAGAAATGC TTCTGCTGCT TCTGATATCA GTAGTATGTC TTCCCGCTCT TCAAGTTCTG TTTCAGCTTC CAGCAGACGC AGTACAAATC TATGTTTCGA CGAGAAACTT TTCCTGCAGT CACTTTACAA GGTCTTGGTG TCTGTATCGG AAACAACTCC GCTAATAATA TACTTGAGAG ATGTTGAGAA GCTTCTTGAG TCAGAAAGAT TCTACAAGTT GTTCCAAAGG CTCTTGAACA AGCTCTCTGG TCCGGTCTTG ATTCTTGGCT CAAGAGTATT AGAACCCGAA GAAGATTGCC AAGAAGTAGG CGAAGGGATT TCCGCTCTAT TTCCTTACAA CATCGAGATC AGACCACCAG AGGATGAATC TCAGCTCGTG AGCTGGAAAT CTCGGTTAGA AGATGACATG AAAATGATTC AATTTCAAGA CAACAAGAAC CACATTGCAG AGGTTCTTGC TGCTAATGAT ATCCAGTGCG ATGACTTAGC TTCGATATGC CACGCAGATA CAATGTGTTT GAGTAACCAC ATTGAGGAAA TTGTGGTTTC TGCAATCACT TATCATTTGA TACACACCAA AGAACCGGAA TACAGAAACG GAAAGCTTGT AATATCTTCC AAAAGTTTGT CTCATGGACT TGGTATATTC CAAGAAGGTG GAAACAGATC ATTCGAAGAC TCCTTGAAGC TAGACACAAA CACTGACTCT AAGCGAAAAG AAGGAGAAGT ATGTTCAAAG AGTGAGTCGA AATCTGGTCC TGAAAACAAA AACGAGTCAG AAATATCGCT CCCTTCAAAC AAAAACGACA ATCCTTTGCC TCCAAAAGCA CCTGAGGTTG TTCCTGATAA TGAGTTTGAG AAGCGTATAA GACCAGAAGT TATACCAGCA AATGAGATTG GTGTGACATT TGCAGATATT GGTTCTCTAG ACGAAACAAA AGATTCACTT CAAGAACTTG TTATGCTTCC ACTTCGAAGA CCGGATCTCT TTCAAGGCGG TCTTCTCAAA CCATGTAGAG GAATCCTATT ATTCGGTCCA CCTGGTACTG GCAAAACAAT GCTTGCAAAA GCAATCGCAA ATGAAGCTGG AGCTAGTTTC ATCAATGTCT CCATGTCTAC AATCACTTCG AAATGGTTTG GAGAAGACGA GAAAAACGTG AGAGCTCTGT TTACTTTAGC AGCTAAAGTA TCTCCAACGA TTATATTCGT GGATGAAGTT GATAGTATGT TGGGACAAAG GACAAGAGTT GGAGAACATG AAGCTATGAG GAAAATTAAG AATGAGTTTA TGACGCATTG GGATGGGCTA ATGACGAAAC CCGGTGAAAG GATTCTCGTT CTTGCAGCGA CAAACAGACC GTTTGATCTT GATGAAGCTA TCATTAGGAG GTTTGAGCGA AGAATAATGG TGGGACTTCC TTCGATTGAG AGCAGAGAGA AGATCTTGAG AACTTTGTTG TTGAAAGAGA AAACAGAGAA TCTTGATTTC CATGAGCTTG GACAGATGAC AGAAGGCTAC AGTGGAAGTG ATCTCAAGAA CTTATGCATC ACAGCTGCGT ATAGACCGGT TAGAGAGCTG ATTCAGCAGG AAAGATTGAA AGATCAGGAG AGGAAGAAGA GAGAAGAAGC AGGAAAAGGC ACAGAAGAAC CAAAAGAAAA AGAAGAAGCA GAAGCTTCTG AGGAGAGAGT TATTACATTG AGACCTTTGA ACATGGAAGA CATGAGAAAA GCTAAAAACC AGGTAGCTGC GAGTTTTGCA TCAGAAGGAG CAGGAATGAA TGAGCTGAAG CAATGGAATG ATTTGTATGG AGAAGGAGGC TCAAGGAAAA AGGAACAGCT CACTTACTTC CTCTGAAAAT TGCAAAAGAT CCGGCATATC ACAAAGAAAG AGTCTACAAT TACTTGTTTA GGCCATTCCA TTTTTAGATA AACTTCTTAG GTTCATTTTA TTCTCTTTCT TTTTTGGGTT TTATAGAATT TTCCTCAAAA CTGTGATTTT TTATATGTTC ATATTTATGT CATTGTGAAT GTGTTAGTTA ATGTAGTAAA CATATTTATA TAAATATTAT GATTGTTT 
Length2948
Protein Sequence
Protein Residue
Map Locationscaffold_8: 14411423.. 14416111
Download Sequence
A.thaliana
AGI-codeAT5G52882.1
DescriptionP-loop containing nucleoside triphosphate hydrolases superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
6 Ahg921733 Transducin/WD40 repeat-like superfamily protein
6.16441 Ahg483087 PYR1-like 6
13.6748 Ahg494672 COP1-interacting protein-related
20.9762 Ahg482617 Family of unknown function (DUF662)
29.5127 Ahg472493 PATELLIN 2
31.3688 Ahg315184 cyclic nucleotide-gated channel 12
32.7109 Ahg907562 Disease resistance protein (CC-NBS-LRR class) family
34.322 Ahg940836 sterol methyltransferase 1
35.8887 Ahg476373 Chaperone DnaJ-domain superfamily protein
37.3095 Ahg919640 Major facilitator superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression