| Annotation |
|---|
| Description | jgi|Araly1|909580|Al_scaffold_0002_2661 |
| Sequence |
ATGGCGGCAT CATCACCACT GTACAATCAG CTCAAGGCTG CTGAACCATT CTTCTTGTTG GCTGGTCCAA ATGTGATCGA ATCCGAGGAA CATATTCTTC GAATGGCAAA GCACATTAAA GACATTGCCA CAAAAGTTGG GCTGCCTCTG GTCTTCAAGT CAAGTTTTGA TAAAGCTAAC AGAACTTCTT CAAAGTCATT TCGAGGTCCT GGCATGGCCG AGGGTCTGAA GATTCTTGAG AAGGTGAAAG TAGCATATGA TCTTCCAATA GTTACTGATG TTCACGAATC AAGCCAGTGT GAAGCAGTTG GCAAGGTTGC AGATATAATT CAGATTCCAG CATTCTTATG TCGCCAGACA GATCTTCTGG TTGCAGCAGC ACACACCGGA AAAATTATCA ATATTAAGAA AGGACAATTC TGTGCTCCTT CTGTCATGGA AAATTCAGCC GAGAAGATCA GACTGGCTGG GAATCCAAAT GTTATGGTTT GTGAAAGAGG AACCATGTTC GGATACAATG ATTTGATAGT AGATCCACGA AACTTTGAGT GGATGAGGGA AGCTAATTGT CCTGTTGTCG CTGATATAAC CCATTCACTA CAACAACCTG CAGGCAAGAA GTTGGATGGT GGTGGTGTTG CTAGTGGTGG CCTTCGCGAG TTAATACCAT GCATTGCAAG AACAGCTGTA GCAGTTGGCG TCGATGGAAT TTTCATGGAG GTTCATGATG ATCCTCTAAG TGCTCCGGTT GATGGTCCAA CTCAATGGCC TTTGCGCCAT CTAGAAGAAC TCCTGGAAGA GCTCATTGCG ATTGCGAGGG TCACAAAAGG GAAGCAGCGG CTCCAAATCG ACCTTACACC CTACCGTGAT TAA |
| Length | 873 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_2: 17625504.. 17627975 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G79500.5 |
| Description | Aldolase-type TIM barrel family protein |
| TAIR curator summary | Encodes a protein with 3-deoxy-8-phosphooctulonate synthase (KDOP synthase) activity which is involved in the biosynthesis of KDO, a component of cell wall rhamnogalacturonan II. |
| Alias | [AtkdsA1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 7.93725 |
Ahg496218 | Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein |
| 15.1658 |
Ahg493196 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
| 18.9737 |
Ahg494672 | COP1-interacting protein-related |
| 19.3907 |
Ahg919644 | amidase 1 |
| 24.1868 |
Ahg487216 | limit dextrinase |
| 30.5778 |
Ahg491487 | Mitochondrial substrate carrier family protein |
| 34.0588 |
Ahg488256 | Flavin containing amine oxidoreductase family |
| 36.1801 |
Ahg488128 | cyclophilin 20-2 |
| 45.3431 |
Ahg490575 | Mitochondrial transcription termination factor family protein |
| 48.9592 |
Ahg485401 | CDPK-related kinase |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
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