Detail



ID : Ahg494702

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|494702|fgenesh2_kg.8__518__AT5G43010.1
Sequence
AAACCCATTG CTCAAGAAAA CTCTTTAGAC AAATTTGTTT CGAGAAAGAT CGTTTGCTTC GGTTTTAAGA AAAATCTGAG ATCTATCTGT AGAAGAAGCA GCAAAAGGAT TCAGAAACTA TGACCGACGT CGATGAATCC GTTAGACGCC GTACCGCTGC GGTCTCCGAG TACCGGAAAA AGCTCCTCCA ACATAAGGAA CTCGAATCCC GTGTTCGAAC AGCTAGGGAC AACTTAAGAG GAGCTAAAAA GGAGTTCAAC AAAACTGAGG ATGATCTTAA GTCTCTTCAA AGTGTTGGGC AGATTATTGG AGAAGTTCTT CGACCTCTGG ATAATGAAAG ATTGATTGTC AAAGCGAGCA GTGGTCCTCG TTATGTGGTG GGTTGCCGAA GCAAAGTCGA TAAGGAAAAG CTAACCTCAG GAACTCGAGT TGTTCTGGAT ATGACAACAC TAACAATAAT GCGAGCCCTT CCCCGAGAAG TTGATCCTGT TGTTTATAAC ATGCTTCATG AAGACCCAGG CAACATTAGC TATTCCGCGG TTGGTGGTTT AGGTGATCAG ATCAGAGAAC TCAGGGAATC TATTGAGCTA CCTCTCATGA ATCCCGAGCT TTTCCTCAGA GTAGGGATCA AACCTCCAAA GGGTGTTCTT CTGTATGGAC CTCCGGGTAC TGGAAAAACT CTACTAGCGA GGGCTATAGC CAGCAACATC GATGCCAACT TCTTGAAGGT TGTATCTAGT GCAATAATAG ACAAATACAT TGGAGAAAGT GCTAGGCTGA TCCGGGAGAT GTTTAACTAT GCCCGTGAAC ACCAGCCTTG TATCATTTTC ATGGATGAAA TCGATGCTAT TGGTGGGCGT CGTTTTAGTG AGGGAACTAG TGCTGATCGT GAAATTCAAA GAACACTTAT GGAGTTACTC AATCAGCTTG ATGGGTTTGA CAACCTCGGA AAGGTGAAAA TGATAATGGC CACAAACAGG CCAGATGTGC TTGATCCTGC GCTTCTCCGT CCGGGAAGGT TAGATAGGAA GATTGAGATC CCTTTGCCAA ATGAGCAATC AAGAATGGAT ATTCTCAAGA TCCATGCAGC TGGTATCGCC AAACATGGTG AAATTGACTA CGAGGCTATT GTCAAACTTG CTGAGGTTTG TTTCAATGGT GCTGATCTGC GTAACATATG CACGGAAGCT GGAATGTTTG CAATCCGAGC AGAGCGGGAC TATGTGATCC ATGAAGATTT CATGAAGGCG GTGAGAAAGC TCAGTGAGGC AAAGAAACTC GAGTCGAGTT CGCACTATAA CGCTGATTTT GGAAAAGAGT GAGAGGGTAC ACTCTTTCTT GTGCTTTAGG GATGAAGAAA GGACATTGCA ATGGCAGTTT CGTATTATTT ATTGGCAATG TGAAACTTGT TTGTTTTACT TTTTGAGGAG CAAAGCTTGT TGTGGACTGT GTGCTTAGTT ACTACGTTTT AGTAATTTAG TGCGTCAAAC AAGCATTTAC CTCTTTTCTC GTTGGTATTG T 
Length1521
Protein Sequence
Protein Residue
Map Locationscaffold_8: 4656478.. 4659338
Download Sequence
A.thaliana
AGI-codeAT5G43010.1
Descriptionregulatory particle triple-A ATPase 4A
TAIR curator summary26S proteasome AAA-ATPase subunit RPT4a (RPT4a) mRNA,
Alias[RPT4A][regulatory particle triple-A ATPase 4A]
Gene coexpression
MR
MR Locus Description
2 Ahg488965
3.60555 Ahg484013 Lung seven transmembrane receptor family protein
3.74166 Ahg487814 26S proteasome regulatory subunit, putative (RPN5)
4.24264 Ahg940649
6 Ahg481718 Argonaute family protein
7.07107 Ahg325616
8.24621 Ahg489475 TCP-1/cpn60 chaperonin family protein
8.7178 Ahg937986 20S proteasome alpha subunit PAD1
12.2474 Ahg336036
13.4907 Ahg484168 cullin-associated and neddylation dissociated
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression