Detail



ID : Ahg494777

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|494777|fgenesh2_kg.8__593__AT5G42650.1
Sequence
TCGCCACTGT TTCGAAGAGA TGGCTTCTGT TTCAACGCCT TTTCCGATTT CTCTCCACCC AAAGATCGTA CGATCAAAGC CGTTGAAATT TCGAGTTTTG ACCCGTCCGA TCAAAGCTTC CGGGTCAGAA ACACCTCCTG ATCTAGCCGT AGCGACACGA ACCGGGTCAA AAGATCTTCC GATCCGGAAC ATACCGGGAA ACTACGGTTT ACCAATCGTT GGACCAATCA AAGACCGTTG GGATTACTTT TACGACCAAG GAGCTGAAGA GTTCTTCAAA TCAAGAATCC GTAAATACAA TTCAACCGTG TACCGAGTCA ACATGCCACC GGGAGGTTTT ATCGCCGAGA ATCCACAAGT TGTGGCTTTA CTCGACGGTA AAAGCTTCCC GGTTTTATTC GATGTCGATA AAGTCGAAAA GAAAGATCTC TTCACCGGTA CTTACATGCC TTCAACAGAC CTCACTGGCG GTTACCGTAT CCTCTCTTAC CTCGATCCGT CCGAGCCTAA ACACGAAAAG CTTAAATCAT TACTTTTCTT CCTCCTCAAG TCATCTCGAA ACCGGATCTT CCCTGAGTTT CAAGCTACTT ACTCCGAGCT CTTTGATTCT TTAGAGAAAG AGCTTTCCCT TAAAGGAAAA GCCGATTTCG GCGGTTCCAG TGACGGAACC GCCTTTAATT TTTTGGCTCG AGCTTTCTAC GGGACGAATC CCGTAGATAC AAAGCTCAAA GCCGACGCGC CCGGTTTGAT CACTAAATGG GTTTTATTCA ATCTCCATCC GTTACTCTCT CTTGGTTTAC CGAGGATTAT AGAAGATCCT CTCCTCCATA CATTTAGTCT ACCACCGGCG TTAGTCAAAT CTGATTACCA GAGACTCTAC GAGTTTTTCT TCGAATCCGC CGGTGAAATT CTCGTTGAAG CCGATAAATT GGGTATCTCA CGAGAAGAAG CGACTCACAA TCTTCTCTTC GCCACGTGCT TCAACACGTG GGGTGGGATG AAGATCCTTT TCCCGAATAT GGTTAAACGG ATCGGGCGGG CGGGTCATAA AGTCCATAAC CAATTAGCGG AGGAGATTAG ATCTGTGATT AAATCCAACG GTGGAGAACT CACGATGGGA GGGATTGAGA AAATGGAGCT AACCAAATCT GTGGTTTACG AATGTCTCCG GTTTGAACCA CCGGTTCCGG CGCAATACGG TAGAGCGAAG AAAGATCTGG TTATCGAAAG CCACGACGCG GCGTTTAAAG TCAAAGCCGG TGAAATGCTT TATGGTTATC AACCGTTGGC GACGAGAGAT CCGAAGATTT TTGATCGAGC GGATGAGTTT GTACCGGAGA GATTCGTCGG AGAAGAAGGA GAGAAGCTGT TGCGGCATAT ATTGTGGTCG AATGGACCGG AGACGGAGAC TCCGACGGTG GGGAATAAAC AATGCGCCGG TAAGGATTTC GTTGTTTTGG TGGCGAGGTT GTTTGTGATT GAGATTTTCC GGCGATATGA TTCGTTTGAT ATTGAGGTTG CTAAGTCGCC GTTAGGAAGC TCCGTTAATT TCACGTCGTT AAGGAAAGCT AGCTTTTAGG AGCCAAGGGT AAATTTGTAA TT 
Length1602
Protein Sequence
Protein Residue
Map Locationscaffold_8: 5816280.. 5817881
Download Sequence
A.thaliana
AGI-codeAT5G42650.1
Descriptionallene oxide synthase
TAIR curator summaryEncodes a member of the cytochrome p450 CYP74 gene family that functions as an allene oxide synthase. This enzyme catalyzes dehydration of the hydroperoxide to an unstable allene oxide in the JA biosynthetic pathway. It shows a dual catalytic activity, the major one being a 13-AOS but also expressing a 9-AOS activity.
Alias[AOS][CYP74A][DDE2][allene oxide synthase][CYTOCHROME P450 74A][DELAYED DEHISCENCE 2]
Gene coexpression
MR
MR Locus Description
6.48074 Ahg923657 4-coumarate:CoA ligase 1
7.14143 Ahg476200 TIFY domain/Divergent CCT motif family protein
10.9087 Ahg951491 myb domain protein r1
12.5698 Ahg922353 Basic helix-loop-helix (bHLH) DNA-binding family protein
13.8564 Ahg491706 glycine-rich protein
16.7332 Ahg928294 Plant neutral invertase family protein
17.1464 Ahg484885 farnesoic acid carboxyl-O-methyltransferase
20.1246 Ahg472142 jasmonate-zim-domain protein 1
21.166 Ahg472278 OPC-8:0 CoA ligase1
30.6268 Ahg476633 TIFY domain/Divergent CCT motif family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression