Detail



ID : Ahg491217

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|491217|fgenesh2_kg.7__650__AT4G34450.1
Sequence
ATTACAGATC TTCTTCCTTC TCCTGTTGCA TCTGAAGATT AAGGTAACAG AAAGCGAGAT CTGAGTGACG GAGTAATTTC AAAGGGAGGT TTTCGAGATC AGCAATGGCG CAACCCCTTG TGAAGAAAGA CGATGATCAC GACGATGAGT TGGAGTATTC TCCATTCATG GGAATTGAGA AAGGAGCGGT ACTTCAAGAA GCTAGAGTCT TTAATGACCC TCAGGTTGAT CCTAGACGAT GCTCCCAGGT CATCACCAAG CTTCTTTATT TGCTTAACCA AGGGGAGTCA TTCACCAAGG TCGAAGCAAC GGAAGTTTTC TTTTCAGTTA CAAAGCTTTT TCAATCAAAA GACACAGGTT TGAGGAGAAT GGTCTACTTG ATCATTAAGG AGTTATCTCC ATCATCTGAT GAGGTTATCA TTGTAACAAG CTCCCTGATG AAGGATATGA ACAGTAAAAT TGATATGTAT CGAGCAAATG CTATTCGTGT CCTCTGCCGG ATAATAGACG GAACCCTTCT CACTCAAATT GAGCGATACT TGAAACAAGC CATTGTGGAT AAGAATCCCG TTGTTTCTAG TGCAGCTTTA GTCAGTGGGC TTCACTTGCT AAAGACAAAC CCAGAAATTG TTAAAAGATG GAGCAATGAG GTTCAAGAAG GTATTCAATC CAGATCAGCC CTTGTTCAGT TCCATGCCCT AGCTTTGCTC CATCAGATAC GCCAAAATGA TCGCTTGGCT GTCAGCAAGT TGGTTGGCAG CTTGACCAGG GGATCTGTCC GCTCCCCCTT GGCTCAGTGT CTTTTGATAC GTTACACCAG CCAGGTTATC CGTGACATGG CCAACCACGG TCAGTCTGGA GAACGTCCGT TCTATGAATT TTTGGAGAGT TGCCTGCGCC ATAAGGCAGA AATGGTGATC CTTGAGGCTG CCAGGGCGAT CACTGAGCTT GATGGTGTGA CAAGCCGAGA ACTGACTCCA GCAATCACTG TTCTTCAGCT CTTTTTGAGT TCCCCCAGAC CAGTGTTGAG ATTTGCTGCT GTCCGGACTC TGAACAAGGT TGCAATGACT CATCCTATGG CTGTCACCAA CTGCAACATT GATATGGAGA GCTTAATCTC TGATCAGAAT AGAAGCATTG CTACACTCGC AATAACCACA CTCTTGAAAA CAGGGAACGA ATCAAGTGTA GAACGCTTGA TGAAGCAGAT AACTAATTTT ATGTCAGATA TTGCTGATGA GTTCAAAATT GTGGTCGTGG AAGCAATAAG ATCGTTGTGT GTGAAATTTC CACTGAAATA CAGATCCTTG ATGACCTTCT TAAGCAACAT TCTTAGGGAA GAAGGTGGAT TTGAGTATAA AAGAGCAATA GTAGATTCTA TTGTGACCAT TATCAGAGAT ATTCCTGATG CAAAGGAAAG TGGATTGCTT CATCTTTGTG AATTCATTGA AGATTGTGAA TTCACATATC TTTCAACACA GGTAATTCTT CATTTTCTGG GAATTGAGGG GCCTAACACC TCAGATCCAA GCAAGTATAT ACGATATATA TATAATCGTG TGCATCTAGA AAATGCCACT GTCCGGGCTG CGGCTGTTTC CACACTTGCA AAGTTTGGGT TTATGGTTGA ATCCTTGAAG CCCCGGATTA CTGTTCTGTT GAAGCGTTGC ATCTATGACA GTGATGATGA GGTCCGTGAT AGGGCAACAC TATATTTGAG TGTTCTTGGT GGTGATGGTA CTGTTGACAC TGATAAAGAG AGCAAGGATT TCCTATTTGG TTCCCTGGAG GTTCCTCTGG TCAACATGGA AACTAGTCTG AAGAATTATG AGCCCTCTGA AGAAGCTTTT GATATCAACT CCGTGCCTAA GGAAGTTAAA TCCCAGCCCC TTGCAGAGAA GAAAGCCCAG GGTAAAAAGC CCACTGGTCT TGGTGCGCCA CCAGCTGCAC CTGCTTCTGG TTTTGATGGC TATGAAAAAC TTCTCTCATC TATTCCAGAG TTTACCGCCT TTGGAAAACT TTTCAAGGTT AGGGCTTCTT TACCTGTGGA GCTAACTGAA GCAGAAACAG AATACGCCGT CGATGTTGTT AAGCATATCT TTGACAGTCA TGTGGTGTTT CAGTACAACT GCACTAACAC AATACCAGAG CAGTTGTTGG AGAGGGTCAA TGTCATTGTA GATGCTTCAG AAGCAGAGGA ATTCAGTGAA GTAACTTCAA AGGCCCTAAA CTCACTTCCT TATGATTCAC CCGGTCAAGC CTTTGTGGTT TTTGAGAAAC CAGCTGGGGT CCCTGCTATT GGAAAGTTCT CCAACACATT GACTTTCGTT GTTAAGGAGG TTGACCCAAG CACAGGTGAA GCAGAAGATG ATGGAGTAGA AGATGAATAC CAGCTAGAGG ATCTTGAGGT TGTAGCTGGA GATTACATGG TGAAAGTGGG TGTCTCCAAT TTCAGGAATG CATGGGAAAG CTTGGATGAA GAAGATGAGC GCGTCGACGA ATATGGCCTT GGCCAAAGAG ACAGTTTGGG AGAAGCTGTA AAAGCTGTCA TCGATCTTCT TGGCATGCAG ACTTGTGAGG GGACGGAGAC AATTCCGCTC AATGCAAGGT CACACACGTG TCTATTGTCT GGTGTGTACA TAGGGAACGT GAAAGTGTTA GTGAGGGCAC AGTTTGGAAT GGACAGCTCA AAGGACATTG CAATGAAGCT GACAGTTAGA GCTGAGGACG TTTCTGTAGC CGAGGCCATT CACGAGATTG TTGCCAGCGG CTAAACCTCT CGCGTTTCTT CAATATCAAA AGAGTGTTAC TATTCCTACT GCTAAAACCT CAAAATACAT CAACTATTAT AAATAGTATA GTATTTTTTA TTTCTTTTTT TCTTGCATTA TTACTGTCAA ATACACTTAT GGAAGTTTTC GTTTTATTAT TTGACGGTGT TTTTTGATTT TTCATTGCTG AATTTTGTCA TTACCCGTTT TCTCGCCAA 
Length2989
Protein Sequence
Protein Residue
Map Locationscaffold_7: 2596941.. 2602227
Download Sequence
A.thaliana
AGI-codeAT4G34450.1
Descriptioncoatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP, putative
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
2 Ahg490616 Protein phosphatase 2C family protein
4.47214 Ahg480677 VPS35 homolog A
6.48074 Ahg933625 SHAGGY-related protein kinase dZeta
6.9282 Ahg495939 regulatory particle triple-A ATPase 3
10.3923 Ahg494823 P-loop containing nucleoside triphosphate hydrolases superfamily protein
12.3693 Ahg474170 Ergosterol biosynthesis ERG4/ERG24 family
12.4097 Ahg475764 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
13.4907 Ahg942264 Threonyl-tRNA synthetase
14.8997 Ahg473945 calcium-dependent lipid-binding family protein
16.9706 Ahg341449 varicose-related
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression