Detail



ID : Ahg494873

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|494873|fgenesh2_kg.8__689__AT5G48220.1
Sequence
TTGTGATTAT CCGCCGCACA AAAGTGTCTC CTCCACTCCA CAAAATAGCA TTCCCGGCGA GAGAGAGCCA CGAAGACTCA AAAAGAAAAA AAATGGAAGC AATGCGTTCT CTTCAGCACT TTCCCTCCTC CGCCATTCAA CGACGGCTCT CTCAGTTTAA CATCCACGAT AAACTTACCA GACCCTCTTC TTGTCTTCCT CTTCGTGCTC AAAAGTCTGG AATCACTGAA GGTTCCGGTA AAGTAAGTGA TCTCAAGATT AGTGAACAAG AAGTGGGGAT GTACCAGAAT GAAGTAGTTG AGAGTCAGGG TATTAGGATA AGGAGAAGAC CACCTACTGG ACCTCCATTG CATTACGTTG GACCTTTTGA GTTCCGCCTC CAGAACGAGG GTAACACGCC TCGTAATATC TTGGAAGAGA TCGTATGGCA CAAGGATAAA GAAGTTGCTC AGATGAAAGA GAGGAAGCCT CTTTATACCT TGAAGAAGGC TCTTGATAAT GTTCCTCCTG CTAAAGACTT CATTGGTGCT CTTAGATCAG CTCATCAAAG AACGGGGTTG CCTGGTTTAA TAGCTGAGGT TAAGAAAGCT TCTCCAAGCA GAGGAATCCT GAGAGAGGAT TTTAACCCGG TTGAAATTGC ACAAGCTTAT GAGAAGGGTG GAGCAGCATG TCTTAGTGTT TTGACAGATG ACAAATACTT CAAGGGAAGC TATGAGAACC TGCAAGCTAT AAGGGAAGCT GGTGTAAAGT GCCCTTTGCT ATTGAAAGAG TTCATTGTTG AGGCATGGCA GATATACTAT GGTAGAAGTA AAGGCGCAGA TGCAGTTTTG TTGATCGCTT CTGTGTTACC TGACCTTGAC ATCAAATACA TGATTAAGAT TTGCAAAATA CTGAAAATGG CTACACTTGT GGAGGTTCAT GACGAAAGGG AGATGGATCG TGTTCTTGCA ATTGAAGGAG TCGAGCTCAT TGGCATCAAT AACCGTAACC TTGAAACATT TGAGGTAGAT CTTGGTATCA CAAAGAAGCT ACTTGAGGGA GAGCGTGGCG AATTGATCCG TCAAAAAAAC ATCCTTGTGG TTGGAGAATC TGGGTTATTC ACTCCCGAAG ATATTGCCTT TGTTCAAGAA GCCGGCGTCA AAGCAGTTCT AGTCGGTGAA TCTCTTATTA AACAAAGTGA TCCGGGGAAG GCAATCAGCT CCCTTTTTGG AAGAGATATC TCCGAGTAGA AACTTTTTGT ATAGAGAAAA TCTTCATTGC GTCTCCATTG AAGTCTCTTC TTTTTAAAAA TAATGCTCAA GTGTGCAGGG ACTTTTTGCC TTTACAGAAA TGTCCATGCA CATTGTGTAC TTAAAATTTA GCTATCAAAT GTCAAATCTT GGTCGACGTT TCAATCAATA CATGAGAATA AATCAT 
Length1416
Protein Sequence
Protein Residue
Map Locationscaffold_8: 10818217.. 10856040
Download Sequence
A.thaliana
AGI-codeAT5G48220.1
DescriptionAldolase-type TIM barrel family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
8.3666 Ahg491430 tocopherol cyclase, chloroplast / vitamin E deficient 1 (VTE1) / sucrose export defective 1 (SXD1)
10 Ahg481880 phosphate transporter 4;1
11.4455 Ahg928005
15.4919 Ahg472217 Pseudouridine synthase/archaeosine transglycosylase-like family protein
15.6525 Ahg485723
16.9115 Ahg326806 Integrase-type DNA-binding superfamily protein
21.2838 Ahg481805 outer plastid envelope protein 16-1
21.6333 Ahg922594 myo-inositol monophosphatase like 1
24.3926 Ahg483346 cold regulated 15b
25.9808 Ahg470691 NAD(P)-linked oxidoreductase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression