Detail



ID : Ahg495401

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|495401|fgenesh2_kg.8__1217__AT5G53280.1
Sequence
ACAATTAAAG TGAAAATTTT CCTGAAGAAG AAGAACTTTT GCTTTTTTTT TTCCCTCTTT TTTGGTGTGT CAATGAAATG GGAGAAATGG AGATCGAAGA AATCGAAGCT GTTCTTGAGA AAATCTGGGA TCTACATGAC AAGCTTAGCG ATGAGATTCA CTTGATTTCG AAGTCTCACT TTCTCAAATC GGTTAAACCT TCTAATAGAT CGGAGAAGAG AAAGAATCCC CACGGCAATT CCGGCGAAGA TAAGCGACCG GGTTATGTTT TCATCAAAGG ATTCGCCGTA GATGATAACG ACTCCACGAT TCAAGAGGCG AAGAGTCTTA ACGCTATTCG AACCGCTCTT GAGAACCTTG AAGACCAGCT TGAGTTTTTC CATACTATAC ATACACAGCA ACGAACAGAG AGAGATCTTG CAATTGCTCG GCTTGAGCAG AGCAGGATAT TACTGGCAAT GAGATTGGCT GAACACCACG GCAAGAACTA TGGAGTCTTA GAGGAAGCTC TTGCATTTGT TGGGAGCATT AAAACCACCT CGCATTACGT TTCACCTGAT CACCTCTACG ATTCCTCTCC AAACCCAGAC GGAGCAAACT CTACACCTGC TGGAATAAAG TCAAACTTTG TGATCAACGC CTTTGCCTCA ACTTTCGGGT TTGCAAAAAG AGCACTTGGA TTCAACCATG TGAAAGGTGT ACTTGGAAAC GCTGCTATAT TCGCCATTAG CATGGTCGCT ATGCTACACC TTCACCAAGT GGCTACTAGT GAACATCATC TACAGAAGAA AGAAGACAGA TTCTACAGAA GCCAACAGAG GAAAACATAC GGAAGAGATA AGTCTTCAGG TGACAGAAGT TTGGACCACT TGGACGTGAT GATGGCTCGT GGTTAAGACC AGGGATCAAA CTTGTCTACA CGTGAGAAAA ACTAAGAAGA GAAGAGATAA TTGTTTGCTC TCCTAGGTTT CGATATTATC AGTAAAGGGA TAAGAATTTG GAGGCAAAGT GTTGGAATTT TCTGACCTCA TCTGATGCAA ATATTGTTCT TTTCTTCTCG TTTTGATTTT CAATCACTGT GGTTA 
Length1085
Protein Sequence
Protein Residue
Map Locationscaffold_8: 14662743.. 14664715
Download Sequence
A.thaliana
AGI-codeAT5G53280.1
Descriptionplastid division1
TAIR curator summaryAn integral outer envelope membrane protein (as its homolog PDV2), component of the plastid division machinery. Similar to ARC5, PDV1 localized to a discontinuous ring at the division site in wild-type plants. PDV1 and PDV2 are required for localization of ARC5 at the chloroplast division site. Topological analysis showed that the large N-terminal region of PDV1 upstream of the transmembrane helix bearing a putative coiled-coil domain is exposed to the cytosol. Mutation of the conserved PDV1 C-terminal Gly residue did not block PDV1 insertion into the outer envelope membrane but did abolish its localization to the division site.
Alias[PDV1][PLASTID DIVISION1]
Gene coexpression
MR
MR Locus Description
26.6083 Ahg471206 alpha/beta-Hydrolases superfamily protein
27.6225 Ahg947541 Nucleotide-sugar transporter family protein
46.0543 Ahg318028
46.5403 Ahg940367 NAD(P)H dehydrogenase C1
54.2218 Ahg471402 copper chaperone for SOD1
55.3173 Ahg331125 Leucine carboxyl methyltransferase
67.5722 Ahg480385
76.0592 Ahg494049 solanesyl diphosphate synthase 2
77.3563 Ahg474208 polymerase gamma 2
84.4808 Ahg931833 arginine decarboxylase 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression