Detail



ID : Ahg940367

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|940367|scaffold_600911.1
Sequence
TTCCGGCGAT ATTCAAAGTC AACAATGGCC GTTCTCTCCT CCGTATCTTC TCTCTTACCC TTCTCTTATG GGGCAAAGAG ACTGACTAGT AAAGCTTCTT TAGCTTCAAG AACTTCTGGA TTCAATCTCT CTTCTCGTTG GCACTCAACG AGAAGCGCCC CTAGGTTGTA TCTTTCGAGG GCAGTGACAA ACAACAGTGG CACCACAGAG ATTTCTGAGA ATGAAACAGC TCCAAGGACT TACACATGGC CTGATAACAA GAGACCAAGG GTGTGTATTC TAGGTGGTGG GTTTGGAGGA TTGTACACAG CTTTGAGATT AGAATCGCTT GTGTGGCCTG AAGACAAAAA ACCTCAGGTT GTTCTGGTTG ACCAATCCGA ACGTTTTGTG TTCAAGCCGA TGTTGTATGA ACTTCTCTCT GGAGAAGTTG ATGTGTGGGA GATTGCTCCC CGTTTCTCGG ATTTACTTAC AAACACGGGG ATCCAATTTC TCCGAGATAG AGTGAAAACA TTGCTTCCTT GTGACCATTT AGGAGTGAAT GGGTCTGAAA GTTCTGTTAC TGGAGGAACT GTCTTGCTCG AAAGCGGTTT TAAAATTGAA TACGATTGGT TGGTTCTTGC TCTTGGCGCT GAATCTAAAC TCGATGTTGT TCCCGGCGCA ATGGAGTTGG CTTTCCCATT CTACACTCTT GAAGATGCTA TTAGAGTTAA CAAAAAGCTG AGTAAATTGG AGAGGAAGAA TTTCAAAGAC GGCTCTGCCA TAAAAGTGGC TGTTGTTGGG TGCGGATATG CAGGAGTTGA GTTGGCTGCT ACCATATCAG AGAGACTGCA AGATCGTGGA ATAGTGCAGT CCATTAACGT ATCAAAGGAT ATACTAACAT CAGCCCCTAA TGGGAACAGG GAGGCGGCTA TGAAGGTCCT TACGTCGAGA AAAGTCCAAT TACTTTTGGG TTATCTGGTT CAATCCATAA AGAGAGCAAG CGACTCAGAA GAAGATGAAG GATATTTGTT AGAGCTTCAG CCTGCAGAAA GAGGATTAGA GAGTCAAATT ATTGAAGCGG ATATAGTGTT ATGGACAGTC GGTTCTAAGC CTTTGCTTAC CAAACTAGAA CCCTCGGGTC CCAATGTCCT TCCTTTGAAT GCTAGAGGAC AAGCGGAAAC AGACGAGACA CTCCGTGTTA AAGGACATCC ACGGATTTTT GCATTAGGTG ATTCTTCTTC TCTAAGAGAC TCAAATGGAA AGCTTCTTCC TACAACAGCT CAGGTTGCTT TTCAAGAAGC AGACTTTACT GGCTGGAATA TTTGGGCAGC CATAAATAAC CGACCGTTAT TACCATTCAG GTTTCAGAAC CTAGGTGAGA TGATGACTCT TGGAAGATAT GATGCTGCTA TTTCGCCAAG TTTCATTGAA GGGCTTACTC TTGAAGGTCC AATTGGCCAC GCAGCAAGAA AACTGGCGTA TTTGATTAGA CTACCAACTG ATGAACACCG GTTTAAGGTC GGAATCAGTT GGTTTGCTAA ATCTGCTGTT GACTCAATTG CTTTACTTCA GAGCAATCTA ACCAAGGTTT TGTCTGGTTC TTGATCTCTG TTTGTTTTGC TCTGG 
Length1605
Protein Sequence
Protein Residue
Map Locationscaffold_6: 3504922.. 3507659
Download Sequence
A.thaliana
AGI-codeAT5G08740.1
DescriptionNAD(P)H dehydrogenase C1
TAIR curator summary
Alias[NDC1][NAD(P)H dehydrogenase C1]
Gene coexpression
MR
MR Locus Description
3.4641 Ahg483374 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein
3.87298 Ahg929841 sodium:hydrogen antiporter 1
6.16441 Ahg487706 Small GTP-binding protein
9.74679 Ahg939512 Protein of unknown function, DUF647
9.79796 Ahg950495 GTP-binding protein, HflX
11 Ahg940699 integral membrane TerC family protein
12.2474 Ahg494803 FtsH extracellular protease family
15.8745 Ahg326806 Integrase-type DNA-binding superfamily protein
16.2481 Ahg491801 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
16.8523 Ahg945153
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression