Detail



ID : Ahg494049

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|494049|fgenesh2_kg.7__3482__AT1G17050.1
Sequence
TTTTTTATTT TTTATATTTC CGAAAATTTT CCATACACAC ATCCAATCTC GCTCGTCAGC ACAAATTAAC ATTGGACTCT CAGTTTCCGA AGATTCTTCC CTTTGGACTC TTAGTTTCCG AAACTTATTA ACCGTCTTTT TTTTGGTTTT TGGGTTTGCA TAAAAGTTGT CGTCACTTGT GGATTTTGTC TGAGAAATGA TGATGTCATG TCGGAATATA GACTTGGGTA CGAGTGTTCT TGATCATTCT TGTAGCTCTT CTTCAACAAG TCGTCGATTC TTGTTTGGGA ATTGTTCCAA GAATGTTTGT ATGATTGGTG GCAGAAGCTG TGCTGGAAAT TTGGTCTTTC TCCGGCGAGA TTTTGGTACT TGTAGAGCGG TTCCGGCTAA ATCCAAGGAG AATTCTCTGG TCAATGGTAT TGGTCAAGAT AAAACAGTGA TGCTCAATCT GAGGCAAGAG TCACCAAAGC CGATATCTTT GGAAAATCTG TTTGAGGTAG TAGCTGATGA TTTGCAGAGG TTGAACGACA ATCTTTTATC GATTGTTGGT GCAGAAAATC CGGTTTTGAT ATCTGCTGCT GAGCAAATCT TCAGTGCTGG TGGCAAGAGG ATGAGACCGG GTTTGGTATT CCTTGTATCA CGAGCCACTG CGGAATTAGC TGGCTTAAAG GAACTTACAG TAGAACATCG GCGTTTAGGT GAGATCATTG AGATGATTCA CACCGCAAGT TTGATACACG ATGATGTGTT AGACGAAAGT GATATGCGAA GAGGAAAAGA AACGGTTCAC GAGCTTTTCG GAACAAGAGT AGCTGTATTA GCTGGAGATT TCATGTTTGC TCAAGCATCA TGGTACTTAG CAAATCTCGA AAACCTCCAA GTCATTAAGC TCATAAGTCA GGTAATCAAA GATTTTGCAA GCGGTGAGAT AAAGCAAGCA TCAAGTTTAT TCGATTGTGA TGTCGAGCTT GATGACTACT TGCTAAAGAG TTACTACAAG ACAGCTTCAT TAGTAGCTGC AAGCACCAAA GGAGCTGCAA TTTTCAGTAA AGTCGAAAGC GAGGTCGCAG AGCAAATGTA TCAGTTCGGA AAGAATCTCG GTTTATCTTT TCAAGTAGTT GATGACATTC TGGACTTCAC TCAATCCACA GAGCAGTTAG GGAAACCTGC AGCTAATGAC TTAGCCAAAG GTAACATAAC AGCGCCAGTG ATCTTCGCAC TAGAGAATGA GCCGAGGCTA AGAGAGATCA TTGAGTCTGA GTTTTGTGAG CCTGGATCGC TTGAAGAAGC GATTGAAATA GTTAGAAATC GCGGTGGGAT CAAGAAAGCT CAAGAATTGG CTAAGGAGAA AGGTGAGCTT GCGTTAAAGA ATCTGAATTG TCTTCCGAGA AGTGGTTTCA GATCGGCTCT TGAGGATATG GTGATGTTTA ATCTTGAAAG GATTGATTAG CTTCAAAGGG TATTTGGCAG AGGAAACTGT AACACTCTTT ACTTGTTTCA AACTTCAAAC ACAGATTTTT TTTTACTGTA TGTCACAAAG GAAAATCATG CTTATTATTG C 
Length1561
Protein Sequence
Protein Residue
Map Locationscaffold_7: 21844995.. 21847266
Download Sequence
A.thaliana
AGI-codeAT1G17050.1
Descriptionsolanesyl diphosphate synthase 2
TAIR curator summaryEncodes a protein with solanesyl diphosphate synthase activity.
Alias[AtSPS2][SPS2][solanesyl diphosphate synthase 2]
Gene coexpression
MR
MR Locus Description
4.58258 Ahg483787 SPA (suppressor of phyA-105) protein family
6.40312 Ahg480385
7.61577 Ahg947423 ADP-ribosylation factor-like A1A
8.94427 Ahg938584
9.79796 Ahg927953 Ankyrin repeat family protein
13.5647 Ahg494585 P-loop containing nucleoside triphosphate hydrolases superfamily protein
14.7986 Ahg479910 Protein kinase superfamily protein
15.3623 Ahg890839 ATP-dependent RNA helicase, mitochondrial (SUV3)
16.3095 Ahg326806 Integrase-type DNA-binding superfamily protein
16.7033 Ahg492093 fatty acid desaturase A
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression