Detail


ID : Ahg495641

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|495641|fgenesh2_kg.8__1457__AT5G55550.1
Sequence
ATTATAGGAT GAACAAAACA TCCTCTGTTT CTCTATTCAT CTTTTTCTCT ACATTTCCTC ATCTGGGTCA TCTCCAAAAA TGATTTGAAG ATCACCCAAA TTCGCAATTT GATTAGGACA ACAACAACAA CAACTTTATT TATCTGATTC CGTCTTAGAT TTTCAGACAA CAAAAAGAAG AAGAAGATGG AATCGGATCT GGGGAAGCTC TTCATTGGTG GGATTTCGTG GGATACAGAT GAAGAAAGGT TAAGAGACTA TTTTAGCAAC TATGGTGATG TTGTTGAAGC TGTGATCATG AGAGATCGTG CCACAGGACG TGCACGTGGC TTCGGCTTCA TTGTCTTTGC AGATCCTTGT GTCTCAGAGA GAGTGATCAT GGAGAAACAC ATCATCGATG GCCGCACGGT TGAGGCCAAG AAGGCCGTGC CTCGAGATGA TCAGCAGGTG CTAAAACGAC ACGCTAGTCC TATCCAACTT ATCTCACCTG TCCATGGCGG TGGCGGTGGA AGGACAAAGA AGATCTTTGT TGGAGGTTTA CCGTCTAGCA TTACCGAGGA AGAGTTCAAG AACTACTTTG ATCAGTTTGG TACAATTGCT GATGTTGTGG TAATGTATGA TCATAACACG CAGAGGCCAA GAGGTTTTGG CTTCATCACA TTTGATTCAG ATGATGCTGT TGATAGGGTT CTTCACAAGA CCTTTCATGA GCTCAATGGG AAACTAGTCG AGGTCAAAAG AGCTGTACCT AAGGAGACTT CCCCTGTTTC TAATAACCGA AGCCCGCTTC CTGGCGGTCT TAACTATGGA GGCGGGTCTA ATAGGATTTC TGCTAATAGC TACTTTAATA ACTTTGCTCC TGGTCCTGGT TTTTATAACA ATCTAGGCCC TGTTGGTGGT CGGTTTAGTC CTATTATTGG TAGTGGTAGA AATGCGGTTT CTGCTTTCGG CCTCGGTTTG AATCATGAGT TGAGTTTGAA TTTGAATCCA AGCTATGATG GGACAAGCTC TACATTTGGG TATAACCGTA TTCCAAGCAA CCCTTACTTC AACGGTGCTT CCCTGAACCG TTACACCTCT CCAATCGGGC ACAATAGAAC TGAGTCTCCT TACATTTCGA ACAATAGAGA CTTATGGGGA AACAGAACCG AGACTGCAGG TCCCGGTTGG AACTTGAATG TCTCGAATGA AAACAACAGA GGAAATTGGG GACTTCCTTC TTCTGCTGTT GGTAATGATA ACAATGGCCA TGGAAGAAAC TATAGGACAA GTTCTGGACT TTCCTCGTCC CCATTTAACG GTTTTGAAGG TTCTATAGGG GAATTGTACA GAGGCAGCTC AGTTTACAGC GACTCAACGT GGCAGCAACA ACAGCAGCTA GCGTCTCAGT CTTCTCACGA GCTAGACAAT TTGTCTCGCT CTTACGGTTA TGATATTGAC AATGTAGGTT CAGACCCATC TGCAAATGAC TCAGAAGGTT ACAATGGAAG CTACAATGTT GGAAATAGAC AAACTAATAG AGGTATTGCG GCATAGGTTA TCAAAAACCA AGAAAACAAA AAAAAAGTTG AGAGATTTGT AGATTGAAAG CAACCAATTT CAGTTGCAGA GTTTGAAGAG GTTTTCTTCT CATGACAAAG ACACCAACTT TGTTGATCAC AGTGCCAAAG ATTCTGGATT GCTTTCTCTT TTGTTAGTCC AAAAAAAACA AAAGAGAAAA ACAAAGAACA GTTTTTCTTT TCTTCTTACA TAAAGATCAG ATCGTAGCAG CCAAAGATAC TACAAGGTGG ATTTAGATCT TCTTCTCAAA AACTTTTTTT TTTCTTTCAT AGAAATAACC AAACAAAGAT CGTAGAATTT TCGATCAAAG ATTCTTCAGA GTTCTGTGCT CTGTTTTGTA ATTTTACTTT CTTTTTTTCT TATTTACAAA TTGAATTGTT CATGAAAGCT TTGATTTCTT TTTTAAATTA GCGTGGGAAA ATATATTGTG TAAGAGAGGG ATATGACTAT TTTGTTGCAC GTATCCCTAA TGAGATATAT
Length2040
Protein Sequence
Protein Residue
Map Locationscaffold_8: 16046197.. 16048735
Download Sequence
A.thaliana
AGI-codeAT5G55550.3
DescriptionRNA-binding (RRM/RBD/RNP motifs) family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
11.7898 Ahg477894 long-chain acyl-CoA synthetase 6
16.7332 Ahg329122 zinc finger WD40 repeat protein 1
23.9165 Ahg894461 AP2/B3-like transcriptional factor family protein
31.5595 Ahg482806 chaperone protein dnaJ-related
40.2492 Ahg939541 mRNA capping enzyme family protein
41.5692 Ahg479783
48.2494 Ahg481564 DNAJ heat shock N-terminal domain-containing protein
51.5752 Ahg484397 N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein
55.4527 Ahg949921 myosin heavy chain-related
56.8331 Ahg484485 actin related protein 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression