Detail



ID : Ahg945361

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|945361|scaffold_701590.1
Sequence
TCTGCTAGGT TATCGTCGTC ATGATGCAGC AGCCACCTCC AGCTTCTAAC GGTACTGCCG CAGGGTCAGG GCAGATTCCT TCCGACCAGC AAGCTTATCA CCAGCAGCAG CAGTCGTGGA TGATGCAGCA CCAGCAGCAA CAACAAGGTC AGCCGCCTGC AGGATGGAAT CAGCAGTCTG TACCGTCTCC TGGCCAACCT CAGCAGCAGC AATATGGTGG TGGTGGTGGA TCTCAGAATC CAGGATCAGC TGGTGAGATC CGGTCGCTGT GGATCGGTGA CTTGCAGCCA TGGATGGAGG AGAACTATCT CATGAGCATC TTTGCTCTTA CTGGCGATGC TACATCAGCT AAAGTTATCC GCAATAAACA GAGTGGATAT TCAGAAGGTT ATGGGTTTAT TGAGTTTGTG AACCATGCTA CAGCTGAGAG GATTTTACAG GCTTACAATG GTGCTACAAT GCCCAACAGT GACCAGGCCT TCAGGTTGAA CTGGGCTCAG CTTGGAGCTG GAGAGAGACG CCAGGCTGAA GGGCCTGAGC ACACGGTTTT TGTTGGAGAC TTGGCGCCTG ATGTTACGGA CCACATGCTT ACTGAAACGT TTAAGGCTGT GTATTCCTCT GTCAAGGGAG CTAAAGTTGT GACTGATAGG ACTACTGGAC GGTCCAAGGG ATATGGATTT GTCAGGTTTG GGGATGAAAG CGAGCAGATT CGTGCCATGA CTGAAATGAA TGGTCAATAC TGCTCATCAA GGCCTATGCG TACTGGTCCA GCTGCCAACA AGAAGCCTCT TACAATGCAA CCAGCTTCAT ATCAGAACAC TCAAGGAAAC CAAGGAGAAA GTGATCCAAC TAACACAACA ATTTTTGTCG GAGCTTTGGA TCAAAGTGTA ACAGAAGATG ATTTGAAGTC GGTTTTTGGT CAATTTGGTG AACTAGTTCA TGTGAAAATA CCAGCAGGAA AACGTTGCGG ATTTGTTCAA TACGCCAATA GGGCATGTGC AGAGCAAGCC CTCTCCTTGT TGAACGGAAC ACAACTGGGT GGACAAAGCA TTCGTCTTTC ATGGGGTCGC AGTCCTTCCA ACAAACAGAC TCAACCTGAT CAAGCCCAGT ATGGTGGTGG TGGTGGTGGA GGATACTATG GGTATCCTCC TCAGGGATAT GAAGCATACG GATATGCACC TCCTCCTCAG GACCCTAACG CCTACTACGG TGGTTATGCT GGGGGCGGCT ATGGAAACTA CCAGCAGCCT GGTGGCTACC AGCAGCAACA GCAGTGAAGC ATGATGTGTA AGTCGTG 
Length1297
Protein Sequence
Protein Residue
Map Locationscaffold_7: 5967362.. 5970151
Download Sequence
A.thaliana
AGI-codeAT4G27000.1
DescriptionRNA-binding (RRM/RBD/RNP motifs) family protein
TAIR curator summary
Alias[ATRBP45C]
Gene coexpression
MR
MR Locus Description
1.41421 Ahg495758 Class II aminoacyl-tRNA and biotin synthetases superfamily protein
1.41421 Ahg906988 ubiquitin-conjugating enzyme 28
2.64575 Ahg932325 Rer1 family protein
5.2915 Ahg927697 Proteasome component (PCI) domain protein
5.91608 Ahg944105 Tetratricopeptide repeat (TPR)-like superfamily protein
6.48074 Ahg927721
7.07107 Ahg312852
7.74597 Ahg322676 nonsense-mediated mRNA decay NMD3 family protein
9.48683 Ahg486740 Carbohydrate-binding-like fold
10.0995 Ahg951336 cyclin dependent kinase group C2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression