Detail



ID : Ahg935633

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|935633|scaffold_403621.1
Sequence
TTGGATCTTT TGGTTTCTTC AATGGCGAAT GTAGATGCTG ATTTCAGAAC ATCACGGTCT AATGATGATC AATTGTACTC GGAGCTATGG AAAGCTTGTG CAGGGCCACT TGTGGAAGTT CCTCGTTCTG GTGAAAGAGT TTTTTACTTC CCTCAAGGTC ACATGGAACA ATTGGTGGCT TCTACTAATC AAGGAGTTGT TGATCAAGAA ATACCAGTGT TTAATCTTCC TCCAAAGATA CTTTGTCGAG TTCTTAGTGT TCTGTTAAAA GCAGAGCATG AGACAGACGA GGTTTATGCT CAGATTACAT TACAACCAGA AGAAGATCAA AGTGAACCCA CAAGTCTTGA TCCACCTTTG GTCGAACCAG CTAAACCAAC GGTTGATTCG TTTGTGAAGA TTCTAACAGC TTCTGATACA AGCACTCATG GTGGATTCTC TGTTCTTCGT AAACACGCCA CTGAGTGTTT ACCTTCACTT GATATGACAC AACCTACACC GACTCAAGAA CTTGTAGCTA GAGATCTTCA TGGCTATGAA TGGAGGTTTA AGCATATATT TAGAGGGCAA CCAAGGAGGC ATTTACTTAC AACGGGTTGG AGTACATTTG TAACCTCGAA AAGACTTGTA GCTGGAGATG CATTTGTGTT CTTGAGGGGT GAAACCGGGG ATTTACGAGT TGGTGTGAGA CGTTTAGCTA AGCAGCAAAG CACGATGCCC GTATCAGTTA TTTCGAGTCA GAGTATGCGT CTGGGAGTTC TTGCTACAGC TTCTCATGCT GTTACCACAA CAACTATATT TGTTGTCTTC TATAAACCAA GGATAAGCCA ATTTATAATC AGTGTGAACA AGTATATGGT GGCGATGAAG AACGGGTTTT CTCTCGGTAT GCGGTTTAGG ATGAGATTCG AAGGAGAAGA GTCTCCTGAG AGAATATTTA CAGGTACGAT TGTTGGTAGT GGAGATCTAT CTTCTCAATG GCCAGCTTCC AAATGGAGGT CATTGCAGAT CCAATGGGAC GAGCCATCTT CTATTCCGAG ACCAAACAAG GTCTCACCGT GGGAGATTGA GCCTTTCTCA CCATCTGCGC TTACCCCGAC GCCTACTCAA CAACAATCAA AGTCCAAACG GTCCAGACCC ATTGAAATCA CAGGGAGTCC CGCAGCTTCT AATTTCTTGA GTAGCTTCCC GCAGAGCCAC GAGTCTAATC CATCAGTCAA ATTGTTGTTT CACGATACAG CAACTGAGAG AAACTCAAAC AAATCAGTGT TTTCAAGTGG ATTACAATGC AAGAAAACCG AGGCTCCGGT CACAAGTTGT TGTAGGTTAT TCGGATTCGA CCTCACGAGC AAGCCTGCTT CTGCTCCAAT TCCTTGTAAC AAGCAACTAA TAAGTGTGGA TTCAAATATC TCTGATTCTA CCCCCAAGTG TCAAGATCCT AACTCCTCGA ACTCACCAAA AGAGCAGAAA CAACAAACAT CCACAAGAAG CCGAATTAAG GTGCAAATGC AAGGAACAGC GGTAGGGCGC GCGGTTGATT TAACATTGTT GAGATCATAC GATGAGTTAA TCAAAGAGCT AGAGAAAATG TTTGAGATTG AAGGAGAGCT TAGTCCTAAA GACAAATGGG CTATCGTGTT TACAGACGAT GAAGGAGATA TGATGCTTGT AGGAGACGAT CCATGGAATG AGTTCTGTAA AATGGCAAAG AAGTTATTCA TATATCCGAG TGATGAGGTC AAGAAATTGA GCTCGAAGTC GTTGTTGCGT GATGAAGGTA CAATCGTATA TCTTAAATCG GATCAGAGGA CAATTCACGT TTAACTACCA AGTTCTTGAT TTCT 
Length1844
Protein Sequence
Protein Residue
Map Locationscaffold_4: 21440354.. 21443458
Download Sequence
A.thaliana
AGI-codeAT2G46530.3
Descriptionauxin response factor 11
TAIR curator summary
Alias[ARF11][auxin response factor 11]
Gene coexpression
MR
MR Locus Description
17.6352 Ahg919001
19.799 Ahg470832 RNAligase
26.8328 Ahg496070 telomeric repeat binding protein 1
27.0555 Ahg489834 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
33.9117 Ahg918322 Leucine-rich repeat protein kinase family protein
37.9605 Ahg482680 Tetratricopeptide repeat (TPR)-like superfamily protein
39.975 Ahg927010
40.3733 Ahg487632 Cytochrome P450 superfamily protein
42.0476 Ahg943233 Ubiquitin-like superfamily protein
51.0294 Ahg491286 Protein phosphatase 2C family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression