Detail



ID : Ahg496296

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|496296|fgenesh2_kg.8__2112__AT5G61370.1
Sequence
ATGAGGTCCA TTGTCAGATC AAACGGGATT GTGTTTGTAA CGAATACAAT AAAGCTGACA CGTTATTTTT GCTCTCATCA TTTGGTAGAT CGACCGGACC GTGCATCGAC TGAATTGCAG GAAGTTATTA GGATTGTTTC TTCCCCAATT GGTGGTTTAG ATGATCTTGA AGAAAACTTG AACCAGGTTT CGGTTTCTCC ATCATCCAAC CTTGTTACCC AAGTGATTGA GTCTTGCAAG AACGAGACTT CACCGAGAAG GTTGTTGAGA TTTTTCTCCT GGTCGTGTAA AAGCCTGGGA TCTAATGTAC ACGACAAGGA GTTCAACCAT GTCCTAAGAG TTTTGGCTGA GAAGAAGGAT CACACAGCTA TTCAGATACT CTTATCAGAT CTCAGGCAGG AGAATCGGGC GATGGACAAG CAAACGTTTA GCATTGTCGC TGAAACTCTG GTTAAGATTG GTAAGGAAGA AGATGCAATA GGTATCTTCA AGATCCTGGA CAAGTTTTTA TGCCCACAAG ATAGCTTTAC TGTGACGGCT ATTATAAGTG CGCTCTGTTC CAGAGGACAT GTGAAGAGAG CATTGGGAGT TATGCATCAT CACAAGGATG TAATCTCAGG GAATGAATTG TCTGTGTATA GAAGTCTTTT ATTCGGGTGG TCGGTACAAA GAAACGTGAA GGAAGCAAGA AGAGTTATAC AAGATATGAA ATCAGCGGGG ATTACACCGG ATTTGTTCTG TTTCAACTCG TTGCTTACCT GCCTCTGCGA AAGAAACGTG AATCGAAACC CATCTGGGCT TGTTCCTGAA GCTTTGAATA TTATGTTGGA GATGAGGTCT TACAAAATCC AACCTACGTC TATTAGTTAC AACATATTGC TTTCTTGTCT AGGAAGGACG AGAAGGGTGA GAGAGTCTTG CCAGATTTTA CAACAGATGA AGAGGTCGGG ATGTGATCCC GATACAGCGA GCTATTACTT TGTTGTGAGG GTTCTGTATT TAACAGGAAG GTTTGGTAAA GGAAACCAAA TTGTGGATGA GATGATCGAG AGAGGCCTGA GACCCGAACG CAAATTCTAT TATGATCTGA TCGGGGTTCT TTGTGGGGTC GAGCGGGTAA ATTTTGCGCT TCAATTGTTT GAGAAGATGA AGAGAAGCTC AGTGGATGGT TATGGTCCGG TTTATGATCT GCTCATTCCA AAACTATGTA AAGGAGGAAA CTTTGAGAAA GGAAAAGAGC TTTGGGAAGA GGCAATGTCA CTTAATGTTA CACTTAGTTG CTCCATTAGT TTGCTTGATC CATCTGTCAC AGAGGTTTTC AAACCTATGA AGAAGAAAGA AGAAGCTGCA ATGGTGGATC GCCGTGCACT TAACTTGAAG ATTCACGCTA CAATGAACAA AGCAAAGCCA AAACTGAAAC CAAAACCGAA ACGCAGGAGC AAGACAAAGA AGAAGAATCT GCGGCAATGA ATGTATCACA ATAAACTCAG GTAAGATGTT TGCTTTAGTA ATGCAGAAGC AAAGGACATG AGATTATTTC GTTGTTCTCT TTGTCTCATT GATTCTTATT CTGAAAAATT CCAGTTTTGA AGAATACAAA CAAAGACAAA AGAATCTTGT GATCAATTCG AATGTGTTAT TTTTACAAGT 
Length1650
Protein Sequence
Protein Residue
Map Locationscaffold_8: 18774861.. 18776541
Download Sequence
A.thaliana
AGI-codeAT5G61370.1
DescriptionPentatricopeptide repeat (PPR) superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
31.9374 Ahg355947 Tetratricopeptide repeat (TPR)-like superfamily protein
35.0999 Ahg356828 cold regulated gene 27
38.3406 Ahg492148 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
39.6989 Ahg894546 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
46.1519 Ahg930442 Protein of unknown function (DUF803)
62.7853 Ahg952367 SPFH/Band 7/PHB domain-containing membrane-associated protein family
72.5534 Ahg484454 Tetratricopeptide repeat (TPR)-like superfamily protein
74.6458 Ahg933964 Pentatricopeptide repeat (PPR) superfamily protein
79.1833 Ahg482768
79.8999 Ahg325494 translocon at the outer membrane of chloroplasts 64-V
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression