Detail



ID : Ahg496370

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|496370|fgenesh2_kg.8__2186__AT5G61970.1
Sequence
CACCGACCCG TTTCGTTACT ACTTGCTTGA GATTCAATCG AAAACTGAAA TTCGCACGCC TCCGCTGCTC GCCGTCGCCC ACATCGGAAT ATTCCATTGG CACAACCGTG AAATCATCTC ATCAGATCAA AACGGGGTTT TAACTAGAAT TGTGTGGATT AATGGGGAAG AAGGAGAGCG AGTTGTCTGC AATGGAGATC GACGATCCGA AATCTGAAAG CTCTGATCAG ATCCTTCCGA GGTTCTCGAT CAATGTTCTG CAGCTGATGA AATCTTCTCA GGCGCAACAT GGTCTGCGTC ATGGTGACTA TGCTCGCTAT CGGAGGTATT GCTCAGCACG TTTGAGGAGG TTATACAAGT CCTTGAAATT CACTCATGGC CGTGGTAAAT ACACTCGACG AGCCATTCTT GAATCAACTG TCACTGATGT TAGGTTCCTT CATGTGGTTT TCTATATGGC GGAAAGAGCA TGGAGCCATG CAATGGAAAA AAGACAGTTA CCAGATGGGC CTAATGCACG GCAGCGGATA TATTTGGTTG GTAGGCTAAG GAAGGCAGTT AAATGGGCTT CCCTTTTCTC AAGTTTGTGC TCTATTAAGA CAGATTCCAG GACATCACTG GAAGCTGAGG CATATGCATC CTATATGAAA GGTACTCTGT TGTTTGAGCA AGATCAAAAT TGGGAAACTG GGTTGGCATG TTTCAAAAAC GCCAGAGCTG TTTATGAGGA ACTTGGGAAA TATGGAGATC TAGAAAACCA AGTTCTTTGC CGGGAACGGG TTGAGGAGCT TGAGCCTAGT ATTCGATACT GCCTACACAA AATTGGCAAG TCAAACTTGC AGACATCTGA ACTTCTTCAG ATTGGTGAGA TGGAAGGCCC TGCATTGGAT CTTTTCAAAG CAAAAATAGA GGCTGCTATG GAAGAGGCTA GATCTCAACA AGCTGCATCT CTTACAGAGT TTAATTGGCT TGGCTACAGA TTTCCGGTTT CGAACCCAAA ATCTCGGGTT TCTATTTTAA AAGCCCAGGA ACTTGAGAAG GAGCTACAGG GTCCGACAGC AGAATCTCTC CCTGCAGAGA AAAAGCTAAC CATCTTTGAT AAATTATTCA CTGCATATCA TGATGCCAGG AACACCATAC GCAGTGACTT GGTAAGTGCA GGAAATGCTG AATCTGTTAA AGATGACCTA AATGGTTTGG ACAAAGCTGT TGGAGCTGTG CTAGGACAAA GAACCATTGA ACGGAACCAG TTGTTGGTTA AAATAGCAAA GAGTAAACTG AACAGGAAAC GTGATGATAA AAGTGAAAAG GTTACTAGGC CTGAAGAGCT TGTTCGATTG TATGACCTTC TATTACAGAA TGTCGCTGAT CTTTCTGATC TCATTAGCTC TGGAAGAGAC AGAAAACCTG AAGAGATTGC CTTTGAAGAA GAGTGTCAGC ACAAAAGCTT GGCCTTCCGT GCTGAAAGGT GCTTCTACTT GGCAAAGTCA TATAGTCTAG CTGGAAAGAG GGCTGAAGCA TTCGCCCTGT ATTCTCGTGC TCGATCTCTT GCTGAAGATG CCCTGGACAA GTTTCAAAGC ATAGCAAAGA AAGATGAGGG AACAATCCAG GAACTGAAGA CACTGATTAA AGAATGCAGA GCTAATAGCT GCATAGAGCA TGCGACCGGG ATTATGGAGG AAGAGAGGGT TCCAGAGAAT CTGTCGAATA GAATTTCAAC TATATCACTA AACGATACAG CTGCGCAGGT GGAGGAGAAG TACCTGTTAG ACAAACTGGA TGTGTATGAA TCTGCGGTTG GCGATTCAAA CACGAAAACC GCCCCAAAGA TTGAACGGTT CCCACCGGCA TTCCAATCAA TACCGCGTAA TCCGATTGTT CTAGACCTTG CCTACCATTG CATCGACTTC CCAGATATTG AAAACAGGAT GAAGAAAAAA GGAGGAGGCT TCATGAGCCG TATTAATCTC TGGGGGACAA AGTCCTAAAA ACTTTAAACC GGCTTTCTCT CTAAGGTTAA AAAAGAATCT CGGATTCAAT CTCCCCTTTT TTACCAGACT CTGAAACTTG TTGCTCTTTT TTAGCTTCTA AAACGAAATG CATAAGATTT CTGTTAATTT ATTTTGTCGA TTTATCACAG AATCACAATT TAGACATTTT GTTCTTCCAT TTTAGTGACA CTTGAAATTT TGGAAATATA GACCAATTTT AATGGT 
Length2216
Protein Sequence
Protein Residue
Map Locationscaffold_8: 19042700.. 19047303
Download Sequence
A.thaliana
AGI-codeAT5G61970.1
Descriptionsignal recognition particle-related / SRP-related
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3 Ahg894054
4 Ahg313324 Mediator complex, subunit Med10
9.79796 Ahg470464 RING/U-box superfamily protein
12.2474 Ahg325603 Translation elongation factor EF1A/initiation factor IF2gamma family protein
12.3693 Ahg470079 armadillo repeat kinesin 2
15.0997 Ahg495780 CwfJ-like family protein / zinc finger (CCCH-type) family protein
17.2047 Ahg472407 ATPase family associated with various cellular activities (AAA)
17.6068 Ahg480309 ARM repeat superfamily protein
19.8997 Ahg935522 SIN3 associated polypeptide P18
21.166 Ahg928450 Kinase-related protein of unknown function (DUF1296)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression