Detail



ID : Ahg496862

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|496862|fgenesh2_kg.8__2678__AT5G67380.2
Sequence
TAGTGAATGA TAGATACGCT CTTCTTCGAA TCTCCTCTTC GACGTCTCTT GTGCGCCGTC TTAACCTTAC GTGCGCCGTT GGCGCACTCT CCTATCCTAC GCTCATCTAT CGTCACTCCC ACAGCGAAAG CTGTCTCCGA CGTTTCCGGT AGTACCACGA TCGATCCAGA TTCTTTCGTC GAGATCTCTG ATTCTAACCA GACGCGAGCG ATGTCGAAAG CTCGTGTTTA CACCGACGTT AACGTGATTC GACCTAAGGA TTATTGGGAT TACGAGTCAC TCATTGTTCA ATGGGGGGAG CAAGATGATT ATGAGGTAGT AAGGAAGATA AGAAGAGAGA TTAAAATACT TCAGAACCTT TGCGGTGGGC CAAATATTGT CAAGCTGCTT GATGTTGTTA GAGATCAACA TTCGAAAACT CCAAGCTTGA TTTTTGAATA TGTTAACAGC ACAGACTTTA AAGTTCTGTA TCCTACGTTG ACTGATTACG ACATTCGTTA CTATATCTAT GAGCTTTTGA AGGCACTGGA CTTCTGCCAT TCACAAGGAA TAATGCACAG AGACGTCAAG CCTCACAATG TTATGATTGA CCATGAGCTG CGTAAGCTTC GTCTTATAGA TTGGGGTCTT GCTGAGTTTT ACCACCCTGG AAAAGAGTAT AATGTCCGTG TTGCTTCTAG ATACTTTAAG GGACCTGAAC TTCTCGTGGA CTTGCAAGAC TATGACTATT CATTGGATAT GTGGAGTCTT GGTTGTATGT TTGCTGGGAT GATATTCCGT AAGGAACCTT TCTTCTACGG CCATGACAAT CAGGATCAGC TAGTGAAAAT TGCCAAGGTG ATTGGGACTG ACGAATTGAA TGCTTATCTG AACAAGTACC AGTTAGAACT TGACCCACAA CTCGAAGCAC TTGTTGGGCG GCATAGCAGG AAACCTTGGT CCAAATTCAT CAACGCAGAC AATCAGCATT TGGTGTCACC AGAGGCGATT GATTTCCTCG ACAAGCTACT TCGGTATGAT CATCAAGATA GATTAACTGC AAAAGAAGCC ATGGCACACG CTTACTTCGC CCAAGTTAGG GCAGCAGAAA CCAGCAGAAT GAGAAGTCAA TGAACACAGA GATCTGTCTT TGAACTTTCT GGTGATGATG ATGGTATTGT TCATCTTTTC TTCAAGTATT CTTATATCAA GATGATGTTT CTTCTGTCCA ACAAATTTGT CCTGACTTCA AATGTCTGAA ACCTCTTATA 
Length1250
Protein Sequence
Protein Residue
Map Locationscaffold_8: 20974064.. 20976339
Download Sequence
A.thaliana
AGI-codeAT5G67380.1
Descriptioncasein kinase alpha 1
TAIR curator summarycasein kinase II catalytic subunit alpha
Alias[ATCKA1][CKA1][casein kinase alpha 1]
Gene coexpression
MR
MR Locus Description
1.41421 Ahg495615 DNA topoisomerase I alpha
5.09902 Ahg919131 MOS4-associated complex 3A
6 Ahg922941 AAA-type ATPase family protein
8.83176 Ahg923937 regulatory particle triple-A 1A
12 Ahg952252 BTB/POZ domain-containing protein
12 Ahg950652 BTB/POZ domain-containing protein
14.0712 Ahg478119 RNA-binding (RRM/RBD/RNP motifs) family protein
17.7482 Ahg483663 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta
19.1833 Ahg470078 SEC7-like guanine nucleotide exchange family protein
19.2354 Ahg328224 BR-signaling kinase 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression