Detail



ID : Ahg472678

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|472678|fgenesh2_kg.1__2632__AT1G24170.1
Sequence
CTCTTTTATA ACCAATCTTT CTTCTTCTTC TTCCTCTTTC CTTATCTCTC CATCTCTGTG GAGAGACACA AAACTTCAAA AAAGGAACAT TCTTTCAATT CTTTACTTAA TCTTTCACAA TGCTATATCA TTAGCTTTAA TCTTTTCTTT AATTCAAACG CGTTTTTTTA GTAATGTCGT CGCGTTTTTC TTTAACGGTG GTGTGTTTGA TTGTTCTGTT ACCGTTTGCC GTTGGAATAC GGTTGATTCC GGCGAGGATC ATGAGTGTCG GTGGCGGAGG AGGAGGAGGT AATGGGTTTA GTAAACTTGG TCCGTTTATG GAAGCTCCGG ATTACAGAAA CGGCAAGGAG TGTGTGTCGT CATCAGTGAA CAGAGACAAC TTCGTGTCGT CTTCTTCTAA TGATCCTTCG CTTGTTCACA TAGCTATGAC TTTGGATTCA GAGTATCTCC GTGGATCAAT CGCAGCCGTT CATTCTGTTC TCCGCCACGC GTCTTGTCCA GAGAACGTCT TCTTCCATTT CATCGCTGCT GAGTTTGACT CGGCGAGTCC TCGTGTGCTG AGTCAACTCG TGAGGTCGAC TTTTCCTTCG CTGAACTTTA AAGTCTACAT TTATAGGGAA GATACGGTGA TCAATCTCAT ATCGTCGTCG ATTAGACAAG CTTTGGAGAA TCCGTTGAAC TATGCTCGGA ACTATCTCGG AGATATTCTT GATCGAAGCG TGGAACGAGT CATTTATCTT GACTCAGATG TTATAACTGT TGATGATATC ACAAAGCTTT GGAACACGGT TTTGACCGGG TCACGGGTTA TCGGAGCTCC GGAGTATTGT CACGCGAACT TCACTCAGTA TTTCACTTCC GGGTTCTGGT CAGACCCGGC TTTACCGGGT CTAATCTCGG GTCAAAAACC TTGCTATTTC AACACAGGAG TGATGGTGAT GGATCTTGTA AGATGGAGAG AAGGGAATTA CAGAGAGAAG CTAGAGCAAT GGATGCAATT GCAGAAGAAG AAGAGAATCT ACGATCTTGG ATCATTACCA CCGTTTCTTT TGGTGTTTGC TGGTAATGTT GAAGCTATTG ATCATAGATG GAACCAACAT GGTTTAGGAG GAGACAATAT ACGAGGAAGT TGTCGGTCAT TGCATCCTGG TCCTGTGAGT TTGTTGCATT GGAGTGGTAA AGGTAAGCCA TGGGTTAGAC TTGATGAGAA GAGACCTTGT CCGTTGGATC ATCTTTGGGA GCCATATGAT TTGTATAAAC ATAAGATTGA GAGAGCTAAA GATCAGTCTC TGCTTGGGTT TGCTTCTCTG TCGGAGTTGA CTGATGATTC AAGCTTTTTG TGAGAGTTTA AAAAAAGTTT CATTCTTTTT TCATAAATCT TCTGTTGTAT TACAGAGTTT ACAAATATCA TTGTTCAGGT GAGTGATTCT TTGATTGTCT GGTGTACAAA ATCGATTTTA GAGAGGGAAG AGATATAGAG GCTGTGGAAA AGCCATTGAT GACCCTTATT TTTGTTGAGA ATTCTTTTGT CATTTTGGTG CTCTTGTTTC CAATCTTTTG TTCTGAATAA AACTCATCTT GAAGTGCC 
Length1588
Protein Sequence
Protein Residue
Map Locationscaffold_1: 10196019.. 10197617
Download Sequence
A.thaliana
AGI-codeAT1G24170.1
DescriptionNucleotide-diphospho-sugar transferases superfamily protein
TAIR curator summaryEncodes a protein with putative galacturonosyltransferase activity.
Alias[GATL8][LGT9][GALACTURONOSYLTRANSFERASE-LIKE 8]
Gene coexpression
MR
MR Locus Description
5.74456 Ahg497051 Leucine-rich repeat (LRR) family protein
10.583 Ahg473657 Phosphate-responsive 1 family protein
15.2315 Ahg471170 xyloglucan:xyloglucosyl transferase 33
21.6333 Ahg494984 Pectin lyase-like superfamily protein
25.632 Ahg489716 Phosphate-responsive 1 family protein
26.2298 Ahg484584 Tetratricopeptide repeat (TPR)-like superfamily protein
28.5657 Ahg495518 protein kinase family protein
30.8545 Ahg491115
43.8748 Ahg484603 Peroxidase superfamily protein
46.6476 Ahg927007 SKU5 similar 5
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression