Detail



ID : Ahg887645

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|887645|Al_scaffold_0020_5
Sequence
ATGGATTCTT CTTGTTTCTT CCTTACCATT ATTGCTGCTG CAATAGGATT CTTCTTGCTT TTTAGAAAAC TCAGATTCCA TCAAGAAGAT AACAAAGAAA AGAACTCTTC TTCTTCTTCT TCATCAACAC CATCTTCTTT AGCTCCTTCA TCACCACCAC CATCGTCTTT GGATCGCATC TGGACACACC ATGTGTTTCC AAGTTTCCGA GGGGAAGATG TCCGTAGAGA CTTTCTTAGT CACATTCATA TGGAGTTTCA AAGAATGGGA ATCACACCAT TCATTGATAA TGAGATCGAG AGAGGACAAT CCATCGGTCC CGAACTCATT CGAGCAATTA GAGAATCCAA GATCGCAATT ATCTTGCTGT CAAGAAACTA CGCTTCTTCG AGCTGGTGTC TTGACGAATT GGCGGAGATT ATGAAGTGCA GGGAAGAATT GGGTCAAACA GTTTTGGCTG TTTTCTATAA AGTGGATCCA TCTGATGTAA AGAAGCTGAC CGGAGATTTT GGAAAAGTCT TCAAAAAAAC ATGTGCCGGT AAAACAAAAG AGCACGTTGG GAGATGGAGA CAAGCTTTGG CAAATGTCGC CACAATCGCC GGTTACCATT CGACCAACTG GGATAATGAA GCTACCATGA TTAGAAATAT CGCTACTGAT ATATCCAACA AGTTGAATAA TTCTGCCTCA TCAAGTGATT TTGATGGGTT GGTTGGGATG ACTGCTCATT TGAAGAAGAT GGAACCATTG TTATGCCTAG ACTCAGATGA AGTGAGGATG ATTGGGATTT GGGGTCCTTC TGGGATTGGG AAGACGACCA TCGCCAGAGT TGTATACAAC AAACTCTCTA GCAGTTTTCA ACTGAGTGTC TTTATGGAAT CTATCGAAGC AAAATATACA AGACCATGTT CCGATGACTA TAGTGCCAAG TTGCAGTTAC AACAGCAGTT TATGTCTCAA ATAACCAACC AGAGTGGTAT GAAGATTTCT CATTTAGGTG TTGTTCAAGA TAGGCTAAAA GACAAGAAAG TTCTTGTTGT TCTTGATGGT GTGGACAAGT CAATGCAACT AGACGCCATG GCAAAAGAAA CTTGGTGGTT TGGTCCTGGG AGTCAGATTA TCATCACAGC ACAAGATCGA AAGATTTTTA GGGAACATGG GATTAACCAT ATATACAAGG TGGGTTTTCC ATCAACTGAT GAGGCCCTTC AAATCTTGTG CACATATGCT TTTGGTCAAA AATCCCCTAA ACATGGTTTT GAAGAACTTG CTTGGGAAGT TACAAATCTT GCTGGTGAAC TCCCTTTGGG ACTAAGGGTT ATGGGCTCTT ATTTTCGGGG AATGTCTAAG ATGGAGTGGA CGAAAGCACT ACCAAGGTTA AGGAGTAGCC TTGACGCTGA TATTCTTAGC ATTTTGAAGT TCAGCTATGA TGCCTTAGAT GACGAAGACA AATATTTGTT TCTTCATATA GCTTGCTTCT TCAATTATAA AAGGATTGGG AGAGTGGAAG AGTATCTTGC AGAGACGTTC TTGGATGTGA GTCATCGGCT TAATGGCTTA GCTGAAAAAT CGCTCATATC TATGAACGAC GGAGTGATAA TCATGCATGA TCTGCTAGTC AAACTAGGTA TAGACATTGT CCGTAAACAG TCTCTTCGTG AGCCTGGACA ACGACTATTT TTGGTTGATG CACGAGAAAT TTGTGAAGTA CTCAATCTTG ATGCGAATGG CAGTAGAAGT GTTATAGGCA TAAATTTCAA CTTTGGTGGG AATAGGATCA AGGAAAAGTT ACATATAAGT GAGAGGGCCT TTCAAGGAAT GTCTAATCTC CAATTCTTAA GAGTCAAAGG GAATAACAAT ACAATACATC TACCGCACGG TTTAGAGTAT ATATCTCGTA AACTTCGATT ACTGGACTGG ACTTATTTTC CGATGACATG TTTGCCTCCT ATTTTCAACA CGGACTTCCT TGTTGAACTA GACATGCGTT GCAGCAAACT TGAGAAGTTG TGGGAAGGAA TTAAACCGCT TCCAAATCTC AAGCGGATGG ATTTGAGTTC GTCTCTCCTC TTAAAGGAGC TTCCTGATCT CTCAACTGCC ACCAATCTTC GGACATTGAA TCTTCGTTAT TGCTCAAGTC TGATGAATCT CCCTTCCTCT ATTGGGAATG CCACTAATCT CGAGTTATTA TATCTCGGTG GATGCTCAAG TCTGGTGGAG CTCCCTTCCT CTATTGGGAA TCTCATCAAT CTAAAAGAAT TGGATCTTAG CAGTTTATCA TGTCTAGTGG AGCTCCCTTT CTCGATTGGG AATCTCATCA ATCTAAAAGT ATTGAATCTT AGCAGTTTAT CATGTCTAGT GGAGCTCCCT TTCTCGATTG GAAATGCCAC CAACCTTGAG GTTTTAAACC TTCGCCAATG CTCAAATCTG GTAAAGCTCC CTTTCTCGAT TGGAAACCTT CAGAAGTTGC AGACTTTGAA CTTACGAGGA TGCTCTAAGC TAGAGGTTCT TCCGGCCAAC ATCAAATTGG GATCTCTCTG GTCACTTGAT CTCACTGATT GCATACTGTT GAAAAGGTTT CCTGAGATCT CCACAAACGT TGGATTTATC TGGCTCATAG GAACCACAAT AGAAGAAGTC CCTTCATCAA TCAAATCATG GTCTCGTCCC AATGAGGTGC ATATGTCATA CAGTGAAAAT CTCAAGAACT TTCCTCATGC TTTTGACATC ATCACACGGC TGCAAGTGAC CAATACAGAA ATACAAGAGG TTCCCCCATG GATCAAGAAA TTCTCTCGTT TAACAGTACT CAAACTCAAG GGATGCAAAA AGTTGGTATC ACTCCCACAG ATTCCAGATT CCATCTCTGA CATAGATGCA GAAGATTGTG AGTCCCTGGA GAGACTAGAT TGCTCCTTTC ACAATCCAAA TATTTGGCTC AAATTTGCTA AGTGCTTCAA ACTGAATCAA GAAGCCAGAG ACCTCATCAT CCAGACACCA ACTAGTAAAT CTGCGGTCTT ACCCGGCAGA GAAGTGCCTG CATACTTCAC TCACCAATCT ACTACTGGAG GTTCCTTGAC AATCAAGCTG AACGAGAAGC CTCTTCCTAC ATCCATGCGG TTTAAGGCTT GCATTTTGCT GGTTCATAAA GGTGACAATG AGGAAAACTG GATGGATAAA AATGACTGCT ATGTTTTTTG TAAAAAAAGT AGGCAACATT TACATCCAGT TTTAGAAGAG CATGTGTACG TATTTGAAGT CGAAGCAGAT GTGACTTCCA GCGAGCTTGT CTTTGAGTTC AAGATCAGGA GTAAGAATTG GAAGATAAAA GAATGTGGGG TATTTCAACT CTCGGAGCTT CCTTGA 
Length3366
Protein Sequence
Protein Residue
Map Locationscaffold_20: 36334.. 40077
Download Sequence
A.thaliana
AGI-codeAT5G11250.1
DescriptionDisease resistance protein (TIR-NBS-LRR class)
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
2 Ahg916001 Disease resistance protein (TIR-NBS-LRR class)
4.89898 Ahg887642 Disease resistance protein (TIR-NBS-LRR class)
14.9666 Ahg887641 Disease resistance protein (TIR-NBS-LRR class)
32.8481 Ahg950909 Major facilitator superfamily protein
39.6989 Ahg937390 NB-ARC domain-containing disease resistance protein
40 Ahg343200
46.4758 Ahg895523 cysteine-rich RLK (RECEPTOR-like protein kinase) 39
56.4978 Ahg947835 Restriction endonuclease, type II-like superfamily protein
57.7668 Ahg319227 valyl-tRNA synthetase / valine--tRNA ligase (VALRS)
57.9655 Ahg358356
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression