Detail



ID : Ahg916001

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|916001|Al_scaffold_0008_752
Sequence
ATGGATTCTT CTTCTTCTTT TATCCTTACC ACTGTTGCTG CTGCAATAGG CTTCTTCACG CTTCTTAGAA ATCTCAGATG CCATCAAGAA GATGACAAAG AAAATAATTC TTCTTCTTCT ACTTCATCAC CTCCGTCTTC TTCATCGTCT TTGTCTCCTC CATCGTCTTT GGATCGCATC TGGACACACC ATGTGTTTCC AAGTTTTCGA GGGGAAGATG TCCGTAGAGA CTTTCTTAGT CACATTCAGA TGGAGTTTCA AAGAATGGGA ATCACACCAT TCATTGATAA TGAGATCGAG AGAGGACAAT CCATCGGTCC TGAACTCATT CGAGCAATTA GAGAATCCAA GATCGCAATT ATCTTGCTGT CAAGAAACTA CGCTTCTTCG AGCTGGTGTC TTGACGAATT GGCGGAGATT ATGAAGTGCA GGGAAGAATT GGGTCAAACA GTTTTGGCTG TTTTCTATAA AGTGGATCCA TCTGATGTAA AGAAGCTGAC CGGAGATTTT GGAAAAGTCT TCAAAAAAAC ATGTGCCGGT AAAACAAAAG AGCACGTTGG GAGATGGAGA CAAGCTTTGG CAAATGTCGC CACAATCGCC GGTTACCATT CGACCAACTG GGATAATGAA GCTACCATGA TTAGAAATAT CGCTACTGAT ATATCCAACA AGTTGAATAA TTCTGCCTCA TCAAGTGATT TTGATGGGTT GGTTGGGATG ACTGCTCATT TGAAGAAGAT GGAACCATTG TTATGCCTAG GCTCAGATGA AGTGAGGATG ATTGGGATTT GGGGTCCTTC TGGGATTGGG AAGACGACCA TCGCCAGAGT TGTATACAAC AAACTCTCTA GCAGTTTTCA ACTGAGTGTC TTTATGGAAT CTATCGAATC AAAATATACA AGACCATGTT CCGATGACTA TTGTGCCAAG TTGCAGTTAC AACAGCAGTT TATGTCTCAA ATAACCAACC AGAATGATAT GAAGATTTCT CATTTAGGTG TTGTTCAAGA TAGGCTAAAA GACAAGAAAG TTCTTGTTGT TCTTGATGGT GTGGACAAGT CAATGCAACT AGATGCCATG GCAAAAGAAA CTTGGTGGTT TGGTCCTGGG AGTCGGATTA TCATCACAAC ACAAAATCGA AAGATTTTTA GGGAACATGG GATTAACCAT ATTTACAAGG TGAATTTTCC ATCAACTGAT GAGGCCCTTC AAATCTTGTG CACATATGCT TTTGGTCAAA ACTCCCCTAA ACATGGTTTT GAAGAACTGG CTCGGGAAGT TACACAACTT GCTGGTGAAC TTCCTTTGTG TCTTAGGGTT ATAGGCTCTT ATTTTCGAGG AATGTCTAAG CTGGAGTGGA CGAAAGCACT ACCAAGGTTA AGGAGTAGCC TTGACGCTGA TATTCTTAGC ATTTTGAAGT TCAGCTATGA TGCCTTAGAT GACGAAGACA AATATTTGTT TCTTCATATA GCTTGCTTCT TCAATCGTGA ATGGATTGTG AAAGTGGAAG AGTATCTTGC AGAGACGTTC TTGGATGTGA GTCATCGGCT TAATGGCTTA GCTGAAAAAT CGCTCATATC TTTGAATAGG GGATATATAA ACATGCATGA TTTGCTAGTC AAACTAGGTA GAGATATTGT CCGTAAACAG TCTATTCGTG AGCCTGGACA ACGACTATTT TTGGTTGATG CACGAGAAAT TTGTGATGTA CTCAACCTTG ATGCGAACGG TAGTAGAAGT GTTATGGGCA TAAATTTCAA CTTTGGTGAG TATAGGATCA AGGAAAAGTT ACATATAAGT GAGAGAGCCT TTCAAGGAAT GTCTAATCTC CAATTCTTAA GATTCGAAGG GAATAACAAT ACAATACATC TACCGCACGG TTTAGAGTAT ATATCTCGTA AACTTCGATT ACTACACTGG ACTTATTTTC CGATGACATG TTTGCCTCCT ATTTTCAACA CGGAGTTCCT GGTTGAACTA CACATGAGTT ACAGCAAACT TGAGAAGTTG TGGGAAGGAA TTAAACCGCT TCCAAATCTC AAGCGGATGG ATTTGAGTTC GTCTCTCCTC TTAAAGGAGC TTCCTGACCT CTCAACTGCC ACCAATCTTC AGGAATTGAA TCTCAGTGGT GGCTCCAGCC TGGTGAAGCT CCCCTCCACT ATTGGGTATA CCAAAAATCT TCGGACATTG AATCTTCGTT ATTGCTCAAG TCTGATGAAT CTCCCTTCCT CTATTGGGAA TGCCACTAAT CTCGAGTTAT TAGATCTTAG CAGTTTATCA AGTCTGGTGG AGCTCCCTTC CTCTATTGGG AATCTCATCA ATCTAAAAGA ATTGCATCTT AGCAGTTTAT CAAGTCTGGT GGAGCTCCCT TCCTCTATTG GGAATCTCAT CAATCTAAAA GAATTGCATC TTAGCAGTTT ATCAAGTCTG GTGGAGCTCC CTTCCTCTAT TGGGAATCTC ATCAATCTAA AAGAATTGCA TCTTAGCAGT TTATCAAGTC TGGTGGAGCT CCCTTCCTCT ATTGGGAATC TCATCAATCT AAAAGAATTG CATCTTAGCA GTTTATCAAG TCTGGTGGAG CTCCCTTCCT CTATTGGGAA TCTCATCAAT CTAAAAGAAT TGGATCTTAG CAGTTTATCA TGTCTAGTGG AGCTCCCTTT CTGGATTGGA AATGCCACCA ACCTTGAGGT TTTAAACCTT GACCAATGCT CAAATCTGGT AAAGCTCCCC TTTTCTATTG GAAACCTTCA GAAGTTGCAA AAGTTGACCT TACGAGGATG CTCTAAGCTA GAAGATCTTC CAGCCAACAT CAAATTGGGA TCTCTTTGCT TACTTGATCT CACTGATTGC TTGCTGTTGA AAAGGTTTCC TGAGATCTCC ACAAACGTTG AATTTCTCTA TCTCAAAGGA ACCACAATAG AAGAAGTCCC TTCATCAATC AAATCTTGGT CTCGTCTCAC TAAGTTGCAT ATGTCATACA GTGAAAATCT CAAGAACTTT CCTCATGCTT TTGACATCAT CACAGTGCTG CAAGTGACCA ATACAGAAAT ACAAGAGTTT CCCCCATGGG TCAACAAATT CTCTCGTTTA ACAGTACTCA TACTCAAGGG ATGCAAAAAG CTGGTATCAC TCCAACAGAT TCCAGATTCC CTCTCTTACA TAGATGCAGA AGATTGTGAG TCCCTGGAGA GACTAGATTG CTCCTTTCAG GATCCAAATA TTTGGCTCAA ATTTTCTAAG TGCTTCAAAC TGAATCAAGA AGCCAGAGAC CTCATTATCC AGACACCGAC TAGTAAATAT GCGGTCTTAC CCGGCAGAGA AGTGCCTGCA TACTTCACTC ACCAATCTAC TACTGGAGGT TCCTTGACAA TCAAGCTGAA CGAGAAGCCT CTTCCTACAT CCATGAGGTT TAAGGCTTGC ATTTTGCTGG TTCATAAAGG TGATGATGAG GCTCGTGATG ATGAAAACTG GATGGATGGA AATGGCTTTT ACACTGTTAG TTGTAAAAAA AGTGAGCATC ATTTATATCC AGTTTTAGCA GAGCATGTGT ACGTATTTGA AGTCGAAGCA GATGTGACTT CCACCGAGCT TGTCTTTGAG TTCAAATTCG GCAAACCGAA TTGGAAGATA AAAGAATGTG GGGTATTCCA ACTCTCGGAG GTCCTGTGA 
Length3669
Protein Sequence
Protein Residue
Map Locationscaffold_8: 5069428.. 5084589
Download Sequence
A.thaliana
AGI-codeAT5G11250.1
DescriptionDisease resistance protein (TIR-NBS-LRR class)
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1 Ahg887641 Disease resistance protein (TIR-NBS-LRR class)
2 Ahg887645 Disease resistance protein (TIR-NBS-LRR class)
7.74597 Ahg887642 Disease resistance protein (TIR-NBS-LRR class)
38.5746 Ahg319227 valyl-tRNA synthetase / valine--tRNA ligase (VALRS)
39.6485 Ahg895523 cysteine-rich RLK (RECEPTOR-like protein kinase) 39
46.0977 Ahg343200
48 Ahg895867
65.5439 Ahg891510 Disease resistance protein (TIR-NBS-LRR class) family
69.2965 Ahg473694 Protein kinase family protein with leucine-rich repeat domain
70.7107 Ahg471506 Protein of unknown function (DUF1262)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression