Detail



ID : Ahg888668

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|888668|Al_scaffold_0007_654
Sequence
ATGGCGCAGG TTCAACTTCA GGGTCAGACT CCGAATGGTT CGACCGTGGC GGTCACTGCT GCTTCGGTGA CGTCAGGTGG AGCAACGGCG GCCGGGTTTG GTACCACGTC GCTTTATGTG GGGGATCTCG ATTTCAATGT GACGGACTCG CAGCTTTTCG ATGCGTTTAG CCAAATGGGT CCAGTGGTCT CCGTTCGTGT CTGTAGGGAT TTGGCCACTC GCCGATCCCT TGGCTATGGA TACGTTAACT TCACCAATCC CCAAGACGCT GCAAGAGCGA TCCAAGAACT GAATTACATA CCTCTTTATG GAAAACCTAT TAGGGTTATG TATTCTCATC GTGATCCTAG TGTTCGTCGA AGTGGCGCTG GGAACATTTT CATCAAGAAT TTGGACGAGT CCATCGACCA CAAAGCACTA CATGATACTT TTTCAGTGTT TGGAAACATT GTGTCGTGCA AGGTAGCTGT GGACTCTTCA GGCCAATCAA AAGGCTATGG CTTTGTGCAA TACGCCAATG AAGAATCTGC CCAGAAAGCT ATAGAGAAAC TGAACGGCAT GTTGCTCAAT GACAAGCAAG TGTATGTGGG TCCTTTCCTG AGGAGACAAG AAAGAGATTC CACTGCTAAC AAAACGAAAT TCACCAATGT GTATGTGAAG AATCTTGCGG AAAGTACTAC CGATGATGAC TTGAAGAACG CTTTTGGCGA GTATGGAAAG ATAACAAGTG CTGTGGTGAT GAAAGATGGA GATGGGAAGT CTAAGGGCTT TGGGTTTGTT AACTTTGAAA ATGCTGATGA TGCTGCTAGG GCTGTGGAGT CTCTCAATGG GCACAAACTT GATGATAAGG AGTGGTATGT TGGTAGAGCC CAGAAGAAGT CGGAGAGGGA AACAGAATTA AGGGTCCGTT ATGAACAGAA TTTGAAGGAA GCTGCAGACA AGTTTCAAAG TTCAAACTTG TATGTGAAGA ATTTGGATCC TAGCATTTCA GATGAGAAGC TTAAAGAGAT CTTTTCTCCT TTTGGTACCG TTACATCTTG CAAGGTGATG CGGGATCCTA ATGGAACAAG CAAAGGCTCA GGTTTTGTTG CTTTCTCAAC TCCCGAAGAA GCAACCGAAG CTATGTCACA GTTGAGCGGT AAAATGATCG AAAGCAAGCC ACTCTATGTG GCTATTGCAC AGCGGAAGGA AGACAGAAGG GCTCAGTTTT CCCAAGTGAG GCCAGTTGCA ATGCAGCCGT CTGTTGGTCC CCGCATGCCA GTGTATCCCC CGGGTGGTCC TGGTATTGGA CAACAAATGT TCTATGGTCA GGGCCCTCCT ACCATGATTC CTCCCCAGCC TGGGTTTGGG TACCAACAGC AGCTTGTTCC TGGAATGAGA CCTGGTGGGG GCCCTGGACC CAATTTCTTC ATGCCTATGG TTCAGCAACA GCAGCAGCGT CCTGGGGGAG GAAGACGTCC TGGGGGAATC CAACACCCCC AGCAGCAAAA TCCCATGATG CAGCAACAGA TGCATCCAAG GGGTCGGATG ATCCGGTATC CCCAAGGACG TGGTGGTAGT GGTGAGGTGC CTCCATATGA TATGGGCAAC AACATGCCAT TGCCTATTGG GGCTTTGGCT TCACATCTGG CTAATGCTTC TCCAGAGCAA CAGAGGACGA TGCTGGGTGA GAGTCTGTAC CCGTTGGTGG AGCAGCTTGA GGCAGAGTCT GCAGCCAAAG TGACTGGGAT GCTTTTGGAG ATGGACCAGA CTGAAGTGCT CCATCTATTG GAGTCACCAG AAGCTCTCAA GGCCAAAGTT GCAGAGGCTA TGGATGTTCT CAGGAGCGTC GCTGCTGGTG GTGCAGCCGA GCAGCTCGCT TCCTTGAACC TCTCTTAA 
Length1878
Protein Sequence
Protein Residue
Map Locationscaffold_7: 2768821.. 2772018
Download Sequence
A.thaliana
AGI-codeAT4G34110.1
Descriptionpoly(A) binding protein 2
TAIR curator summaryPutative poly-A binding protein. Member of a gene family .Expressed in stele and root meristem and post-fertilization ovules.Member of the class II family of PABP proteins.
Alias[ATPAB2][PAB2][PABP2][ARABIDOPSIS POLY(A) BINDING 2][poly(A) binding protein 2][POLY(A) BINDING PROTEIN 2]
Gene coexpression
MR
MR Locus Description
3 Ahg471079 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent
6 Ahg934284 Enolase
13.4164 Ahg944252 ferulic acid 5-hydroxylase 1
14.3178 Ahg908052
15.4919 Ahg896031
17.4356 Ahg488410 reversibly glycosylated polypeptide 2
19.3391 Ahg915059
19.5959 Ahg924144 Ribosomal protein S5/Elongation factor G/III/V family protein
22.2261 Ahg487101 isocitrate dehydrogenase V
25.04 Ahg355122 oligopeptide transporter
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression