Detail



ID : Ahg891001

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|891001|Al_scaffold_0007_2987
Sequence
ATGGCTTCTT CTTCTCTACC TCTGTCTCTT CCGTTTCCAC TCCGATCTCG TAGTAGTCCC ACTCGATCTC TACCTTTTCG ATGCTCTCCT CTCTTTTTCT CTCTTCCTTC TTCAATCGTT TGCTTCTCCA CTCAAAACCC CTCCGGTTAC GACCGCGAAG AAGTCCGGTG GCTCCGGGAA GAGCAAAGAT GGATCCGCGA GGAGCAACGA TGGCTTCGTG AAGAACAGAG ATGGATACGT GAGCGTGAAT CACTTCTACA AGAGATTTCG GATCTCCAGC TCAAAATTCA ATCCCTAGAG TCACGAAATT CGCAATTGGG GACTTCTGTT CCCGATACGA TTTCGAATAT CGCTGCGTTG CTTCAGGTTT TGAAGGAGAA GAATCGGATT TCGGAGAGTG GATTGAGCGC AACGCCGATG GTATTGGAGA GTACGAGAGA ACAAATTGTT GAGGAGGTAG AGGAAGTGGA AGAAGAAGTG AAGCGAGTGA TTATTGCTGA AGAGAAAGTT AGGGTTTCGG AGCCGGTGAA GAAGAAGAAG ACGAGACGGA CATTGAAAGT TGGAAGCGAA GGCGACGATG TTCAAGCTTT GCAGGAAGCT TTGTTGAAAT TAGGATTCTA TTCGGGCGAA GAGGATATGG AGTTCTCGAG CTTTTCAAGT GGGACTGCAA GTGCTGTTAA GACTTGGCAA GCATCGCTTG GCGTCCGTGA GGATGGGATA ATGACAGCAG AGCTTCTTCA GAGGTTGTTC ATGGATGAAG ACGTAGAGAC AGATAAGGAT GAAGCAAGTA CAATGAAGAA AGAGGAAGCT GGTAATGGAT CGGTATTTAG TTCAGTGACA CAAGTCCCTG AGAAGAAGCA ATCAATCATA AAAGATCAAA GTAACAGAGA AGATGACGTT ACTCAAAATC GCGTTTATCT TCTTGGAGAA AACAGATGGG AAGATCCTTC CAGGCTCATT GGCAGGAACA AACCGGTAGA CAGTAGTAAA TCCACAATCA CCAAAACGAG GTGCATCACT TGTCGAGGGG AGGGTCGATT GATGTGCCTA GAGTGCGATG GAACCGGTGA GCCAAACATT GAGCCGCAGT TTATGGAATG GGTTGGTGAA GATACAAAGT GTCCGTACTG TGAAGGTCTT GGCTATACAG TTTGCGATGT CTGCGACGGC AAAAAAAACT TATAA 
Length1185
Protein Sequence
Protein Residue
Map Locationscaffold_7: 13789605.. 13791735
Download Sequence
A.thaliana
AGI-codeAT4G13670.1
Descriptionplastid transcriptionally active 5
TAIR curator summary
Alias[PTAC5][plastid transcriptionally active 5]
Gene coexpression
MR
MR Locus Description
14.4222 Ahg471925 Translation initiation factor 2, small GTP-binding protein
17.8885 Ahg490399 Albino or Glassy Yellow 1
18.7083 Ahg490089 tRNA synthetase class I (I, L, M and V) family protein
22.6274 Ahg495179 Transcriptional coactivator/pterin dehydratase
26.1534 Ahg478019 DEA(D/H)-box RNA helicase family protein
29.2916 Ahg474174 Saccharopine dehydrogenase
29.6985 Ahg900573 NAD(P)-linked oxidoreductase superfamily protein
31.225 Ahg473506 P-loop containing nucleoside triphosphate hydrolases superfamily protein
32.4962 Ahg477279 D-isomer specific 2-hydroxyacid dehydrogenase family protein
36 Ahg945153
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression