Detail


ID : Ahg894724

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|894724|Al_scaffold_0006_2720
Sequence
ATGGCGATTC TAGGGCGGAT CACGAGGGTA ACACGAATAA GCAGAAACAA TTCGAGGGTC AGAGTGTGCC CAGTGAGGTA CTTCCAAAGC AAGGACCTTT CAAATACAAA TTCATTCAAT GGCGAAGATG CTGCTAAGCT TCCTGTTCTG ATCGTCGGCG CTGGACCGGT GGGCCTCGTT TTATCCATCC TTCTCACCAA ACTAGGAGTG AAATGTGCTG TTGTGGACAA AGCTACAAGC TTCTCGAAAC ACCCACAAGC ACATTTTATC AACAACCGAT CAATGGAGAT CTTCCGTGCA TTGGATGGAT TAGCTGAGGA GATTGAAAGA TCACAGCCTC CTGTAGATTT GTGGAGAAAA TTTATTTACT GTACATCTCT CTCCGGCTCA ACTCTAGGCA CAGTGGATCA CATGCAGCCT CAAGATTTTG AGAAAGTTGT CAGCCCGGCT TCCGTTGCTC ACTTCTCCCA GTACAAATTG ACAAATTTAT TGCTGAAGCG GTTGGGAGAC CTCGGCTTTC ATGTTCGAGG TTCCAAAGAG TCGGATGGTC TTGAGGTTGA CGCTGTGGTT GCGAGGCAAA TTCTTATGGG TCATGAGTGT GTGGCGATTG ATGCTAACAA GGACAGTATT ACTGCAACTG TTTCTTATCT CAAAGGAGGC AAGCATATGA AAAGAAACAT CCAATGTAGT ATACTGGTTG GTGCTGATGG GGCTGGGAGT GCAGTAAGAA AGCTCACAGC AATAGAAATG CGAGGGGAAA GGGATCTGCA AAAGCTTGTT AGTGTCCACT TCATGAGTAG AGAGCTCGGT GAGTACCTGA TCAGTAGAAG ACCAGGGATG TTATTTTTCA TTTTTAACAC CGATGGTATA GGAGTTCTTG TTGCCCATGA TCTTCTACAA GGAGAATTTG TTTTGCAGAT TCCATACTAT CCACCTCAAC AGAGTCTATC TGATTTTAGT CCTGAGATGT GCAGGATGCT GATATACAAT TTGGTGGGAC ATGAGCTTTC AGACTTGGAT GTAGCTGATA TTAAGCCATG GGTCATGCAT GCTGAAGTCG CCGAGAAATT CATGTGCTGT GAGAACAGAG TGATACTTGC TGGTGATGCT GCTCACCGGT TCCCACCTGC TGGAGGTTTT GGAATGAACA CTGGAATTCA GGATGCTCAT AATCTTACAT GGAAAATAGC AGCTCTTGTT CAGGGTTCTG CAAAATCTTC GATTCTTAAA ACTTATGAAA CAGAACGTAG GCCGATTGCC CTTTCCAATA CTTCACTCAG TGTTCAGAAC TTCAGAGCAG CTATGTCTGT TCCTTCAGCG CTAGGCCTTG ACCCGACAGT TGCAAACTCA GTGCATAGGT TTATAAACAA AACAGTTGGT TCCATCCTTC CAACTGGGCT ACAAAAGGCA ATCTTGGATA ATGTCTTTGC ACTAGGTCGT GCACAGCTTT CAGAATCTCT GTTGAATGAG AGCAATCCTC TGGGAAATCA GAGACTTAGA AGACTAAAGA GTATCTTCGA ACGAGGAAAA AGCCTTCAAC TACAGTTTCC TGCAGAAGAT CTTGGTTTCA GGTATTTAGA GGGAGCCATT GTTCCTGATA ACGAGTCTGA AGCTGGTGAT CCCGAACTAC CGAGTGGTCG TAGAAGAGAC TATGTACCTT GTGCTGAACC AGGTTCAAGA CTGCCACATA TGTATGTGAA AATACTGTCA GATTCCACAA GAGAGGTTAT TGTTTCTACA CTGGATCTTG TTTCGACAGA GAAAGTGGAG TTTCTACTTA TAATATCACC ATTACAAGAG TCCTATGAGT TAGCTCGTGC TACATTCAAA GTCGCAAAAG AGTTTATGGC TAATGTAAAA GTATGTGTGG TCTGGCCTAG TAGTGATGAA GGTCTTGAAA GGGAGAGCAA TTCAGCATTA GCTCCATGGG AAAATTATGT CGATGTTATG GAAGTTATAA GACAAAATGG TGAAGGAACT TCTTGGTGGA GTATTTGTAA AATGTCGGAG AGAGGATCTA TTTTAGTCCG TCCTGACCAA CACATTGCTT GGCGAGCAAA GTCTGGTATT ACTTTGGATC CTACTCTGCA CATGAGAGAA GCCTTCTCCA TCATACTTGG TAAACAATGA
Length2130
Protein Sequence
Protein Residue
Map Locationscaffold_6: 12375692.. 12379107
Download Sequence
A.thaliana
AGI-codeAT1G24340.1
DescriptionFAD/NAD(P)-binding oxidoreductase family protein
TAIR curator summaryA locus involved in embryogenesis. Mutations in this locus result in embryo lethality.
Alias[EMB2421][EMB260][EMBRYO DEFECTIVE 2421][EMBRYO DEFECTIVE 260]
Gene coexpression
MR
MR Locus Description
2.44949 Ahg948886 TBP-associated factor 4
18.1384 Ahg481178 Protein kinase superfamily protein
24.1661 Ahg943759 Nucleotidyltransferase family protein
25.0599 Ahg479191 ubiquitin protein ligase 6
26.1534 Ahg494279 RNA helicase, putative
28.9828 Ahg495654 RNA-binding (RRM/RBD/RNP motifs) family protein
39 Ahg903021 auxin transport protein (BIG)
39.9124 Ahg494809 Ubiquitin-like superfamily protein
40.1248 Ahg483601 RNA-binding (RRM/RBD/RNP motifs) family protein
40.4969 Ahg476843 exocyst complex component sec5
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression