Detail


ID : Ahg948886

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|948886|scaffold_800773.1
Sequence
CAGCTTTAGA GCTAATTTCA ATGGATCCTT CAATTTTCAA GCTCCTCGAA GAAGACGAGG ATGAATCGAT GCATTCAGGA GCTGACGTAG ATGCGTTCCA AGCTGCTCTG AATCGTGATA TTGAAGGTTC TATGACTACT ACACTACCGC TCGTGGCAAA CCCAGGAAAC AATCACTCTC CCAACCAGCA GTTTGCGACA TGGAAGAATG GTATTGGAGA TTCTAATATC AATGTCCAGA CGCAGCACAG CCTTGAAAAT ACTCAAATGA AGGAGCAACA AGGATCAGCT ACAGCTATAG AAAATCAACA TCAACATGAT TTGAAACACG CAAATGAACC TCATTTACAA CACAACCAGC CTCAAGACCT TCATCGAGCT GGTCAATTCT GGGAGAATCC CTCGCAGGTC CCCCAAACAA CTGGGTTACC GAGTTCTGAA AAGAATCCTA CTGGTAATGA ATCAGATAGA TCACATAATC AAGAGAGTGA ATCTCAGTAT ATGAAACTGC AAAAGATGAG TAGTCAACAG GCTCGGGGAG TGGAACCGCC TGTTAACCCT ATAAATGTTA ACCCTATGAA CCGCAACCCT AAGCAAGTAC CATTTGCTGC TTTGCTTCCT ACTTTAATGA ACCAACTCGA TAAAGATAGA GCACTGCAGC TCCGTACCCT ATATGCTAGA CTTAAGAAAA ATGAAATTCC CAAAGAGGGG TTCACACGAC ATATGAAGGA TATTGTAGGC GATCAGATGC TCAGGATGGC AGTTAGTAAA CTCCAACAGG TGAACTATAA CCAGGGAAAA ATTGGAATTC AAGCTCCTTC TACTGAAATC AATAATCAAA AATCTCAGTC TGATCCTCGT GCAGTCCACC TTAACCAACT ACCGTCCTCA GCTTCAGGCA CCTTAGGCAG TTCAGTTCCG GTACAGGGAC TTACCAAACA TCCGCAGCAC CAGATGCAGC ATCCACCAAG TTCTTTTTCT ATGTATACCA CCTCTGGTAG TTTTCACACA TACCCGGGTC CAAACACCAA TGCTTCTGGT TCCTCGTTGA GGCCTCACCT TCATGATTCC CATATGAGAC ATGTGACACA TAACCAGCCT ATGGGATCAA CTGGTCTTGG AGGACCGCCC CAGTCGACCA CAAACATGAT GACTATGCCC AAGTTTGAGA GGCCAAGTTC TGTAAATGAT CCGAATAGGG TTCAAGGTGG CGCTACATCG CACTTCCAGA ACAGCTCATC GCCTCTAAAT TCTGCACCTG GTCAAGGATC ATCAGTGTCC AATGTAAAGC AGGAATTAGT TGATCAAAGT TTTGAAAAGA ATAATGCAGC CTCAGTGACT TCGAATGAGG ACTTAGAGAA GGAGTCCTCT AGAATGGTTT TATCCACACC TAACAACATG GGGCCTGCAA GCTCTGTTTC TCCATCCATG ACAACTCAAC TAGACGCTAG CACAACGATG AATTCTCGTG GCCCATTGGG AAGCTCTCAA GGAGGAGTAA ATGCTAGGAT GCCACCTAAA AAGCCTTCTG TTGGTCAGAA AAAACCTCTT GAGTCATTAG GTTCTTCACC TCCACCACCA AGCAAGAAGC AAAAAGTAGC AGGGAATTCT ATGGATCAAA GTATTGAACA GCTCAATGAT GTCACTGCAG TCAGTGGTGT TAATCTCAGG GAAGAGGAAG AACAATTATT TTCTGGGGCC AAGGAAGATG GTCGTGTTTC CGAAGCATCT CGGAGAGTTG TGCACGAAGA AGAAGAAAGA TTAATCTTGC AGAAAAATCC TCTGCAGAGA AAGCTGGCGG AAATTATGGC GAAAGCTGGT TTAAAGCAGA TAAGCAATGA TGTCGAACGG TGCTTGTCTT TGTGTGTGGA GGAAAGGATG CGAGGACTAT TATCCCATAT AATACGGCTG TCAAAGCAGC GGGTTGATGC TGAGAAATCT AGACACCGGA CTTTTATCAC ATCAGATATT CGGCTACAAA TCAACGAAAT GAATCAGAAG GTGAAGGAGG AATGGGAGAA GAAACAGGCA GAAGCAGAAA AGCTGAAGAA ACCGAGTGAG AGTGAAGAAG GTGATGGTGG AGTTGACAGT GAGAAGGAGA AAGAAGATAA TCGTTCAAAG GGTGTGAAGG TAAATAAAGA AGATGACGAC AAAATGAGAA CGACGGCTGC AAATGTTGCT GCTCGTGCTG CTGTCGGAGG AGATGATGCG TTCTTGAAAT GGCAATTAAT GGCTGAAGCT CGTCAGAAAT CTGTATCTGA AGCTGGTAAA GATGGGAATC AGAAAACTAC TTCAGGTGGA GGAAAGAACT CCAAAGACAG GCAAGATGGT GGACGAAGGT TTTCTGGAAC TGGTGGTCGA AGAGTAGGGA AAAACCAAGG TTCGTCGCTT CAACCGAAAG TGGTGAGGAC AATCTCTGTG AAGGATGTGG TTGCGGTCCT TGAAAGAGAG CCGCAGATGT CCAAATCCAC TCTAATGTAT CGATTAATTC AATAGAAAAC AGAATCATTA TATTT
Length2515
Protein Sequence
Protein Residue
Map Locationscaffold_8: 4419194.. 4425031
Download Sequence
A.thaliana
AGI-codeAT5G43130.2
DescriptionTBP-associated factor 4
TAIR curator summary
Alias[TAF4][TAF4B][TBP-associated factor 4][TBP-associated factor 4B]
Gene coexpression
MR
MR Locus Description
2.44949 Ahg894724 FAD/NAD(P)-binding oxidoreductase family protein
2.82843 Ahg337067 AAA-type ATPase family protein
3.16228 Ahg484577 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein
4.69042 Ahg938862 multiprotein bridging factor 1B
9.79796 Ahg495765 histone acetyltransferase of the GNAT family 2
12.6491 Ahg488835 calcium-dependent protein kinase 19
13.1909 Ahg489361
13.8564 Ahg477943 chromatin-remodeling protein 11
15.4272 Ahg470774 Transcription factor IIA, alpha/beta subunit
17.9444 Ahg486937 DNAJ heat shock family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression