Detail



ID : Ahg896093

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|896093|Al_scaffold_0005_59
Sequence
ACACACGACT CGGACTCCTC TCTTCCTGGT CTTGATGAAC ACACCGCAGA TCTGTTCCCT GAAACCGGCT CTTACAGCGA CGTCGTCGTC GGAGTTCTTG ATACCGGAGT TTGGCCCGAG AGTAAAAGCT ACTCCGACGA AGGATTCGGT CCGATTCCTT CGACTTGGAA AGGCGGATGG GAGGCCGGAA CTAATTTCAC CGCTTCTCTC TGTAACCGTA AACTAATCGG AGCAAGATTC TTCGCTCGTG GTTACGAATC AACGATGGGA CCAATAGACG AATCTAAAGA ATCAAGATCT CCTAGAGACG ACGACGGTCA CAGAACTCAC ACGTCATCAA CCGCCGCTTC GATTATAATC TGGCATTACG TAACAACTGA TCCTAATCCC ACCGCTTCGA TTTCAATCTT AGGAACCGTC GTTGGTGTTA AACCATCTCC GGTGGTTGCA GCGTTTAGCT CACGAGGACC GAATTCGATT ACACCGCTTG GACCACTGCT GCAGGACCAA CCGGGCTCGC TTCCGATTCT CGCCGCGTGG AGTTCAATAT AA 
Length552
Protein Sequence
Protein Residue
Map Locationscaffold_8: 20987420.. 20988640
Download Sequence
A.thaliana
AGI-codeAT5G67360.1
DescriptionSubtilase family protein
TAIR curator summaryEncodes a subtilisin-like serine protease essential for mucilage release from seed coats.
Alias[ARA12]
Gene coexpression
MR
MR Locus Description
15.4272 Ahg930336
15.7162 Ahg922030 regulatory particle triple-A ATPase 6A
17.7482 Ahg913255
30 Ahg322382 Calcium-dependent phosphotriesterase superfamily protein
32.311 Ahg929307 Tetratricopeptide repeat (TPR)-like superfamily protein
40.6448 Ahg906210
42.332 Ahg929555 Plant invertase/pectin methylesterase inhibitor superfamily protein
49.6387 Ahg315557 plastid-encoded CLP P
51.788 Ahg890648 proline-rich family protein
56.3205 Ahg494214 RING/U-box superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression