| Annotation |
|---|
| Description | jgi|Araly1|315557|fgenesh1_pm.C_scaffold_2000590 |
| Sequence |
ATGCCTATTG GCGTTCCAAA AGTACCTTTT CGAAAAAGAT TATTTTTTTT AGGCCAAGAG GTTGATACCG AAATCTCGAA TCAACTTATT AGTCTTATGA TATATCTCAG TATAGAAAAG GATACCAAAG ATCTTTATTT GTTTATAAAC TCTCCTGGTG GATGGGTAAT ATCTGGAATG GCTATTTATG ATACTATGCA ATTTGTGCGA CCCGATGTAC AGACAATATG CATGGGATTG GCCGCTTCAA TAGCATCCTT TATCCTGGTC GGAGGAGCAA TTACCAAACG ATGGGTAATG ATCCATCAAC CCGCTAGCTC GTTTTATGAG GCACAAACGG GAGAATTTAT CTTGGAAGCG GAAGAATTAC TAAAACTTCG CGAAACCATG ACAAGGGTTT ATGTACAAAG AACGGGCAAA CCTATATGGG TTGTATCCGA AGACATGGAA AGGGATGTTT TTATGTCAGC AACAGAAGCC CAAGCTCATG GAATTGTTGA TCTTGTAGCG GTTCAATAA |
| Length | 519 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_2: 8585073.. 8587096 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | ATCG00670.1 |
| Description | plastid-encoded CLP P |
| TAIR curator summary | Encodes the only ClpP (caseinolytic protease) encoded within the plastid genome. Contains a highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). Part of the 350 kDa chloroplast Clp complex. The name reflects nomenclature described in Adam et. al (2001). |
| Alias | [CLPP1][PCLPP][CASEINOLYTIC PROTEASE P 1][plastid-encoded CLP P] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 13.1149 |
Ahg938420 | Protein phosphatase 2A regulatory B subunit family protein |
| 14.1067 |
Ahg946681 | ribosomal protein S19 |
| 18.1659 |
Ahg315525 | DNA-directed RNA polymerase family protein |
| 24.3105 |
Ahg475553 | ribosomal protein S11 |
| 25.7488 |
Ahg908145 | |
| 26.0384 |
Ahg933369 | ribosomal protein L2 |
| 26.1534 |
Ahg890351 | |
| 28.9828 |
Ahg947216 | Carbohydrate-binding X8 domain superfamily protein |
| 48.9694 |
Ahg488429 | B-box type zinc finger protein with CCT domain |
| 49.6387 |
Ahg896093 | Subtilase family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|