Detail



ID : Ahg896256

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|896256|Al_scaffold_0005_222
Sequence
ATGCTCTGCA GAGAGTGCGA CAACGACGCC TTTGACGAAG AAGACGACGG ATATTTCTAC TGCAAACGAT GTGGTGTTCA GGCTGAAGAT CTTATCCAAA CCGGCGTCGA CGATGGCGAT TTAATCGGTG AAGGTGGAGG TACTCACGGC GCAATATATG ACCCCAGATA TCGCCGTACT ATAACACAAC CAGTCACTCC TTCACAGCCT CGTTACACAG ATGACACAAT ACGTTACACT CATTTTAAAT CTCAGCTTGA ATCTGAAATC GAGAAGAAGA AGGATTTGCC CAGTGAAGTG AAGAGAGAGC CTGAGATTTA TCTCGAGAAA GAGCCAACGG AGCCTGTGGA TTTTGGAGCA GAGACTTTAA GTTATGAGGA TTATTACGAT GAAGCAAGAG ATAGATATGT TAAAGCTTTT CTTATGATGA TTACTTATCA GTGTGATGCT TTGGTTGACA AGTTTAATGT CACTCCTTTG ATTATTGGTT TGGTTGGACC TATCTCTTTA CGTTACGTGG CTCTCTCTGG CGTTTACGAT GATGATTGGG CGGATAAAGC CATTCGTGAT TCCGAACTTC AATCAGAAGA TGGTGAAGTA AAAGATGCTA AGCGGCCTAA AACACAGAAA GCCGAGCCTC GTAACTTAGA TGGTAAAAGA GCAGTGACGA TATGGGTTAG TCTGCTTAAA AAGACTCTGC CTTTATCGAG TTCTTTGGCG ATATCTTTTC TTGCTTGTCA CCATGCGGGA GCACCGGTTC TACCAACGGA TATTGTGAGA TGGGCACGAG AAGGAAAGCT TCCGTATTTG TCTTGTTTTA TCGATATTCG AGAGCAAATG GGAGAGCGAT CAGCTGCGTG TCCGGTGAAA ACAAGCATAA TGGCTAGGCC TTTTCAGATT ATTTCTGCTC AGATGTTGGA AGCAGGAGCC GCTTGCATTG CTGATATTAT TGGTTTGCCT TTGCCTCCTG TAAATTTCTA TGGTATAGCG TCAAACTATA TAAAGCGGTT ATCTATTCCT GAGGATAAGA TTCTTGAACT GGTGCGTCTT ATACAGAACT GGTCACTGCC TCCAGAATTG TATCTATCGA AGAATGAGCT GAAGCTTCCT ACCCGGGTGT GTGTCATGTC TATTCTTATT GTAGCTATAC GGATGCTTTA TAACATAAAT GGTTTGGGTG TGTGGGAACG GAGTTTGGAG TTTGTTAATG CTAGTGAGGC GGATATCGAT TTCGAAGAGT TTGATTCTCC AGTTCATGAT GAGGAGGTTT CAGATACAAA TTCAGGTACT GCAGAGTTGT CAGATGTCAC GAAAGCAACC AAATTCGATA CCAAGGAGCT TCTGAAGAAC CTTGAAGCTA AATATTATGA GGTCGCTGCA GAAACCCTTG AATCCGAGAA GGATCTGCTG TCATATCTAT CGCTCGGGAA AAACGAGTTC TTTGCTGGTT TGGAAGAAGA TTTACCTGAC GATACATACA GAACTGTTGA TAACCTGTGG AATGGTTATC CAAAAGAGGA GGATTTCGAA CGGTGTAGGA CTCCACCCAA GAGGGGGAGA GACTGGGATG ATGATGTATC ACTTAACCAA CTTTCATTAG AAGATAGCAA ATTTAGCGAT GGAAACAATC CTTGTAGTAG CCCTTCAAGG AGAAACGAAA GTGTATCAAT GGATCGTGAT TTATCTTCTT CAGAACACGG AGAATCATCA TCACCAGAGA ATCCTCATCA TCAAGAAGAG AAATTAAAGG AAAGAGCGAT AAAAAGACTA ATAACAGACA TGGGAGATAA CTTGTTCTGT TACTTACCAC CTCGTGTGAA GGTAAAGAGA CTAGATTATC TACAATATGT GAGGAAAAAA GAAGATGGAG CATTGATATA CGCGGCTCAC GCAGATTACT ACATTCTTTT GCGGGTTTGT GCTAAGGTAG CTGAGATTGA TGTGAGGAAT ATGCATAGAG GTGTGTTGAG CTTTGAGAGG AGATTGGCTT GGATTGAGAA AAGGATAGAT CAGGTTTTGC ATCTAACTCC ACCTTTTATG ACATGTGACC ACTGTTGTGA TGGTGGGAAT GCTGGAGAAG ATCAAGATGA TTCATAG 
Length2097
Protein Sequence
Protein Residue
Map Locationscaffold_5: 1468540.. 1470821
Download Sequence
A.thaliana
AGI-codeAT2G02955.1
Descriptionmaternal effect embryo arrest 12
TAIR curator summary
Alias[MEE12][maternal effect embryo arrest 12]
Gene coexpression
MR
MR Locus Description
22.9129 Ahg488286 Surfeit locus protein 2 (SURF2)
23.3238 Ahg887884 glutamate receptor 2.7
23.8118 Ahg900954 DNA glycosylase superfamily protein
25.2982 Ahg494895 Glutamate receptor family protein
29.3428 Ahg931532 transportin 1
31.4643 Ahg473263 multidrug resistance-associated protein 1
35.426 Ahg332886
37.1483 Ahg470924 P-loop containing nucleoside triphosphate hydrolases superfamily protein
38.0132 Ahg924738 flavin-monooxygenase glucosinolate S-oxygenase 4
38.6135 Ahg496280 glucuronidase 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression