| Annotation |
|---|
| Description | jgi|Araly1|470924|fgenesh2_kg.1__878__AT1G08600.1 |
| Sequence |
ATGGAGGTGA AGGAAAAAGA TGAAGTGCTA GAGGAAAAGG AGGATACTGT CGAGGCAAAA GAGGATGAGA TGGATATAAT AATAGCTGAA GAAAGAATGG AGGCCAAGCT TGAAGAGGTG AAAGCAAGAG ATGAAAGAGG GGAGCAAAAT GATGTACTGA TGGAAGAAAA CAACAATCAG GCTGAGCAAA AAGATGTACT GATGGAAGAA GACAACAATC AGGCTGAACA AAAAGATGAG GAGATGCAAG ATACTTTTAG TAGATCTGAA AGTTCTGATT TCAATTCAGA CGAAGATGAA CAATTCCTGC CGGGGCGTGA TGATGAGTTG GATTTTGAGA AACCTCTGAG CGAGGAAGAA ATAGAAGAGT TAATTTCAGA TCTTCTGGGA GTTGAGAGCA AGGCTGCAGA AGCTCAAGAA GCACTTGAAA AGGAGTCTCT TTCTAAGGTA GAGAGTGAAG TTAGGGAGGA ATTAGCACAA GCACTCCGTG GTGATGAGTT GGATAAAGCT GTTGCTGCTG AAATGGTGAC TTTTAAAGAC GAATGGGAGG CAAATCTTGA TGAGCTTGAA ACAGAAAGTG CACACTTGTT GGAGCAACTT GATGGTGCTG GAATCGAGCT TCCAAAATTG TACGAAATGA TAGAAAGTCA AGCCCCTAAT GGTTGCTATA CTGAAGCTTG GAAACAAAGA GCCCACTGGG TTGGTACTCA GGTGACAAAA GAAACTGGGG AATCATTAGC TAACGCTGAG AGGTTTCTTC AAACTCATCG GCCTGTCCGA AAACGACATG GAAAACTTTT GGAGGAGGGA GCTAGTGGTT TTCTGGAAAA AAAGTTAGCT GATGGTGATG TTAAAGAATC TCTAGCTGGA ACATCTGAGC TTGAGTGGTC GTCTCTAAAC AAAGTGTTTT CGGAAAAAAG GGACGAGTCG ATTTCCTTTG GTAGTAAGCA TTGGGCTTCT GTTTACTTGG CAAGCACTCC ACACCAAGCT GCAGCCATGG GATTAGAATT TCCAGGAGTC AACGAGGTGG AGGAAATTGA AGAGATTGAT GCAAGCTTGG CAGACCCATT TTTAGCTGAT GCAATTGACA ACGAACGAGA ACTTGCCCTT ACTGAAGAAC AAAAGACAAA TTATATAAGG GTCAAAGAAG AGGATGATAT AAATTGTGAT CGTGAACTTC AACTTCGTTT GAAACGGAAG AGACGCAAGA AAAGATCTAA ACAGGTTATC AGGTGTGCTG CAGAGAATAT GGATGACGAT TCTGTGTATT TGGATGGGAA TTATATTGCC CCAAATTTGG CCAATGATCA AGTGAAAAGT CCGGAGACTA GCACTCAAGT TCATAATAAT GAAGTCAACA AAGAGGGAAA CGGGAATTTG TCTAATTCAG ATGTAGATAA GATGGTCTCC AGCCCAAATA TAAATGTAGA TACCATGAGA GATGATTCAC AGAATCCAGC AAACAGTTTT ATGTGTACTG CCTGTAATAA TGTAGCTGTG GAAGTGCATA GTCATCCCCT TTTAGAAGTA ATAGTTTGCA TGGATTGCAA ACGTTCAATT GAAGATAGAG TTTCTAAGGT TGATGACTCT TTGGAACGTC ATTGTGAATG GTGTGGTCAT ATTGCTGACT TAATAGATTG TAGGACATGC GAAAAACTTT TCTGTGCATC ATGTATAAAG AGGAATATTG GTGAAGAATA CTTGGCTGAA GCTCAATCCT CTGGCTGGGA TTGTTGTTGT TGCTCTCCAA TTCCCTTGCA AAGATTGACA CTGGAACTGG AGAAAGCCAT GAGAGATAAA AAGTCAATAG AATCGAGCTC TGATTCGAGT TCTGATTCCA GCTCTGATAA CAATTCTGTT GATACAGATG CTGATGTCAA TGTAACAATC AGCTCAAAGA AGAAATCGAA AAAGAAAATT CGGCGGATAA TCGATGACGC TGAACTAGGG AAAGATACGA GAACAAAAAT TGCAATTGAA AAGGCACGAC AGGAGCGCCT TAGGTCCTTG CAGTTTTCTG CCAGATACAA AACAATTAGC TCTATGGGAG ACGTGAAATC TATTCCAGAA GGTGCGGAAG TTGAGGTTCT TGGTGATGCT CACAGTGGTT ACATAGTGAA TGTGGTTAGG GAGATTGGTG AAGAAGCTGT GAGAGTTCCT CGTAGCATAT CTGCCAAACT AAAAGTCCAT CAGGTAACAG GGATAAGATT TATGTGGGAA AATATTATAC AGTCTATCAG CAGAGTGAAG TCTGGTGATA AAGGTCTTGG GTGCATTCTA GCACATACAA TGGGCCTGGG CAAAACTTTT CAGGTTATAG CGTTCCTGTA CACTGCAATG AGATGTGTTG ATTTGGGATT GAAAACTGCT CTTATCGTGA CTCCTGTAAA TGTGTTGCAC AATTGGCGAA GTGAGTTTGT GAAGTGGGGG CCTTCAGAAG TGAAACCACT TCGCATCTTC ATGATTGAAG ACGTTTCAAG GGAGAGGAGA TTGGACTTGT TAACAAAGTG GCGAAATAAG GGTGGAGTCT TTTTGATTGG ATATACAAAA TTTAGAAACC TGTCTCTTGG GACGGGGGTG AAGGACTTAA GTGCTGCCAG AGAGATCTGT AAGGCCTTGA GGGATGGACC TGATATACTT GTTTGCGACG AGGCTCACAT CATTAAGAAC ACCAGGGCTG ACACAACACA AGCATTGAAG CAAGTTAAAT GCCAGAGAAG AATTGCCTTA ACTGGCTCAC CCCTTCAAAA CAATCTTATG GAGTATTATT GTATGGTTGA TTTTGTGAGA GAAGGATTCT TGGGAAGTAG CCCTGAGTTT AGAAACCGAT TCCAAAATCC AATAGAAAAC GGACAGCATA TGAATTCAAC TGCGGAGGAT GTAAAAATTA TGAACCAGAG GTCACACATT CTGTATGAGC AATTGAAAGG TTTTGTGCAA CGAATGGATA TGAATGTGGT GAAAAAGGAT CTGCCACCTA AAACAGTCTT CGTAATATCT GTCAAGCTAT CTCCCTTGCA ACGGAAATTG TATAAGAGAT TTCTTAAGCT TTATGGGTTC AGCGATGGAA GAACAGATGA AAGGATGAGA AAAAACTTTT TTGCTGCCTA CCAGGTCTTG GCTCAGATTT TGAATCATCC AGGGATTCCG CAATTAAGAA GTGAAGATAG CAAGAATGGG CGCCGTGGTA GCATTGTTGA TATTCCAGAT GACTGTTCAA GTGATGAAAA TATAGATTAC AACATGGTTA CAGGAGAAAA ACAGAGAACT ATGAATGATT TGCAGGATAA AGTTGATGGA TACCTCCAGA AGGATTGGTG GGTCGACCTA CTTCAAAAAA ATAATTATAA GGTGTCGGAC TTTAGTGGCA AAATGATTCT GCTATTGGAT ATTTTATCCA TGAGTGCTGA TGTGGGGGAT AAAGCGCTTG TGTTTAGCCA GAGTATCCCG ACATTGGATC TCATAGAACT TTATCTTTCA AGAGTACCTC GGCATGGGAA ACAAGGAAAG TTCTGGAAAA AGGGAAAAGA CTGGTATAGA ATTGATGGAA AAACTGAAAG CTCAGAACGC CAGAAGTTGG TTGATAGGTT TAATGAGCCT GACAACAAAA GGGTGAAATG TACACTAATT TCAACCAGAG CGGGATCCCT TGGAATTAAT CTTTATGCTG CTAACCGTGT GATCATTGTT GATGGTTCAT GGAATCCAAC CTATGATCTT CAAGCTATAT TTCGAGCTTG GAGGTATGGC CAAAAGAAGC CAGTATTTGC GTACAGATTG ATGGCACGTG GGACTATTGA AGAAAAAATA TATAAACGTC AGGTAACCAA GGAAGGGCTA GCTGCGAGAG TAGTGGATAG ACAACAAGTG CACAGGACTA TCTCCAAAGA AGAGATGTTG CATCTTTTTG AATTTGACGA TGATGATGAG AAATCCGACG CGGTAACTGA GATAAGCAAG CAAAATGAAG CGGCACAAAG CAATCTGGTG GATAATTCAC AGAAACAGAA GGCCACTTTA TCTCGTGTTG GTTGCGACAA ATTGATGGAG AACTTACTAC AGAGACATGG CCCGAACTGG ATTTCCAGTT TCCATGAGCA CGAGACATTG CTACAAGAGA ATGAAGAAGA AAGACTGACA AAGGAAGAAA AAGACATGGC CTGGGAAGTT TACAGGAGAG CGCTTGAGTG GGAGGAAGTT CAACGTGTCC CACTGAGCGA ATCTCCAGTG GTTCCAAAAC CTTCTCCTTC CATACAAACA GAACCCTTAC CCCAGCCAAA GGGGTTCAAC AGAAGTCGTT TTGTGAACCG CAACTGCACT AGAACCGCGC ACCAGCTTAC ACTCATAAGC CAAGGAAGAA AAGTTGGTAG CAGCACGGTC TGTGGGGAGT GTGGGCGCGT CTTAAGGTGG GAAGATGTTA TACCCGCATC CAAACTTTCA GCGGTAAACT AAATAGTATA TGAACATTGC AAAATTGGTG AGTTCATTTT TCCTTTTTAA AAAAAAATCT GAGACTGAAA ATAGTAACAT TTGAGACTCC CTTTAGATTA TTGATGAGTT AGATTATAAA TCAGGGCGTT TGTTAGGGGC ATGTTGAAAT TTGTAATGGC ACCT |
| Length | 4614 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 3078029.. 3086893 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G08600.3 |
| Description | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| TAIR curator summary | |
| Alias | [ATRX][CHR20] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2.82843 |
Ahg473263 | multidrug resistance-associated protein 1 |
| 3.60555 |
Ahg475439 | Golgi-body localisation protein domain ;RNA pol II promoter Fmp27 protein domain |
| 4.58258 |
Ahg475723 | glutamine synthase clone F11 |
| 8.48528 |
Ahg337119 | ARP protein (REF) |
| 11.1355 |
Ahg478716 | proteasome activating protein 200 |
| 13.2288 |
Ahg490126 | sensitive to freezing 6 |
| 15.6525 |
Ahg915275 | RNA-binding (RRM/RBD/RNP motifs) family protein |
| 16.3095 |
Ahg491066 | ACT-like protein tyrosine kinase family protein |
| 16.4924 |
Ahg322854 | glucose-6-phosphate dehydrogenase 5 |
| 16.7929 |
Ahg490510 | digalactosyl diacylglycerol deficient 2 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|