Detail



ID : Ahg898746

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|898746|Al_scaffold_0005_2712
Sequence
ATGGAGGAGC TCCTCCTCGC CTGCGCCGTT CACCGTCACG GTACTGATTC ATGGGACTCC GTCGCTTCTG AAATCCATAA GCAGAACCCC ACTGTTCGTA CACTCACCGC CATCGACTGT CGTCACAAGT ACAACGATCT CAAGCACCGA TTCTCCTGTA ACCTGGTCTC GCCGGGATCT GCAGAAGGAG AAGAAGATAC TCTCGCCGCC GAGATCTCTT CCGTTCCTTG GCTTGAGGAG TTGAGAAAGC TCCGTGTCGA TGAACTCCGA CGAGAAGTCG AACGTTACGA TCTATCCATC TCGTCCTTGC AGCTGAAGGT GAAGAGATTG GAAGATGAGA GAGAGAAGAG CTTGAAAACC GAGAATTCAG ATCTAGATAA AATCGCGGAG ACGAAAGAGA ACCACAGTGA ATCGGGAAAC AAATCCGGCG TACCGGTCGC CGAGCCGACA AATTCTCCAG ATCCGATTGA TAATAGTCCC GGAACCGGAT CTGAAAACAC GAACAGAGAT GTTAAAATCG CTGAACCAGT GGACGAAGAA CCGAACCGGA TCGACGAGAA GCCGGTCAGA GAGGATTCGG GTAGAGGAAG TTGCGAGAGC GTGGCCAAGG AATCGGATAG AGCAGAACCA GAAAGAGAGG GAGATGACTC GCCCGAGTTC GTTGAGTCAA TGGACGAGTC GAAAGGAGAG GAAGATAGGA AAGAAACGAG TGATGGGCAG AGCTCGGCGA GCTTACCGAG AAAGGAGACG GTAAACCAGG ACCAACCGGA TAACGAAGAT CAATCTCTGA CCGTCAATAA GATCCCCGCT GAATCTCAGC CGTTGATTGA TTTCATCGAG ATTCTTCAGT CTCACCCCAT TGGCTCTCAC TTTTCGCGCC GGCTCGAAAG CCAGGAAACA TCCGAGTACG AAAGGATAAT AAGGCAGCAC ATAGACTTTG AGATGATTCG AAGTCGTGTG GAAGAAGGTT ACTACAAAAC CTCCAGGAGC AATTTCTTTC GGGATTTACT GCTACTAGTC AACAATGTGA GAGTTTTCTA TGGCGAGCCA TCTTCTGAGT TTAATGTCAC AAAGCAGCTT TACCAGCTTA TCAAGAAACA GATGAGTCTT AAGATTCCTA AACAAACCTT ACCAACACCA AAAGAAGAAT CCTTGGTGAC GTCTAAGGAG GAAGTCACAG TCTCTTCTCT AAAACCAACA CTTTCAGTGC CTATTATAGC TTGTCGGAAA CGTAGTTCCT TGGCTGTTAG ATCTTCAGCG TCTGTCACTG AAACTTTGAA GAAAAAGACT AAAGTAGTTC CAACAGTCGA TGAGAAGCCA GTTTCAGAAG AGGAGGAAGA TGAAACCTCT GATAAAGATG TGAAACCTAT TGTTTCTAAG AAGATGACTA GAGGAGGAGC ACCCTCAACA GCTAAAAATG TAGGGAGCAC AAACGTTAAC ACCAGTTTGA ATGCTGGTAT CTCTAGTAAA GGCCGGTCTT CAAACGATAG CTCTGTGCCG AAGAAAAGTG TTCAAGAAAA GAAGGGTAAC AACGCTAGTG GTGGCTCAAA AAAGCAAAGT GCTGCTAGTT TTCTTAAGAG AATGAAAGGG GTTTCATCAT CTGAAACCGT AGTAGATACA GTGAAGGCTG ATTCCTCTAA TGGAAAGAGA GGAGCTGAAC AGAGGAAAAG TAATAGTAAG AATGACAAAG TGGATGCAGT AAAACAGCCT GCTGGTCAGA AACGATTAAC TGGGAAAAAG CCAACAATTG AAAAGGGTAG TCCTGCAAAG AAAAACACTG GTGCCGCCTC TAAAAGAGGC ACTGCTCCTC TAATGACAAA GCGGGACAGT GAAACTAGTG AAAAGGAAAC AGGTTCTTCT ACTCGTCCGA AGAAACGTTC AAAGAGGTGA 
Length1890
Protein Sequence
Protein Residue
Map Locationscaffold_5: 17639060.. 17641298
Download Sequence
A.thaliana
AGI-codeAT3G57980.1
DescriptionDNA-binding bromodomain-containing protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
29.1719 Ahg926973 VPS35 homolog B
38.3927 Ahg492421 MAC/Perforin domain-containing protein
38.9358 Ahg482300 C-terminal domain phosphatase-like 3
39.1152 Ahg891524 homolog of xeroderma pigmentosum complementation group B 1
45.0555 Ahg487844 myo-inositol-1-phosphate synthase 3
46.9042 Ahg941306
54.7449 Ahg345735 Prenyltransferase family protein
56.8683 Ahg473899 exocyst complex component sec3A
59.1946 Ahg472140 Pectin lyase-like superfamily protein
60.8769 Ahg477638 APR-like 5
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression