Detail



ID : Ahg908776

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|908776|Al_scaffold_0002_1857
Sequence
ATGGCTTCAT CATCCCAACG ACGCTGCGTT TTTGTTGGGA ACATTCCTTA CGACGCGACC GAGGAACAAC TCAGAGAAAT TTGTGGAGAG GTTGGACCTG TTGTCTCGTT TAGATTAGTT ACGGATAGAG AAACTGGTAA ACCAAAAGGC TACGGATTTT GTGAGTATAA AGACGAAGAA ACAGCATTGA GTGCTCGTCG TAATCTTCAA AGTTATGAAA TCAATGGTCG TCAATTAAGA GTTGATTTTG CTGAGAATGA CAAAGGCACT GACAAAACCC GTGATCAGAG TCAAGGAGGA TCTGGTTTGC CTTCTACTTC TGTAATGACA GAGTCTCAGA AGCAGATTGG AGGGCCTGGA GATACAAATA TGCACCAGCC CGTTGGTCTC AATGTTGCTA TAACAGCTGC ATCTGTTATG GCGGGTGCGC TAGGTGGTCC TCAGGTCGGT TCGCAGTTTA CACAAAGTAA TCTGCAGGTT CCAGCTAGTG ATCCCCTGAC TCTTCATCTT GCCAAGATGT CTAGAAGTCA GCTTACTGAA ATTATATCGT CCATTAAGTT AATGGCTACA CAGAACAAGG AACAAGCTCG ACAGTTGTTG GTATCAAGAC CTCAGTTGCT TAAAGCTGTT TTCCTGGCGC AGATAATGCT TGGGATTGTG AGTCCGCAAG TCTTGCAGTC GCCAAATATT GTTCAGGCCC CAAGTCATAT GACAGGGTCT TCAATTCAAG ACACGCAATT ATCTGGTCAA AATCTTTTAC CGCCACTGGC TCAAAGGTCG CAGCAGCTAA GTCGTGCTCC CCAGAGTCAG TATCCTGTTC AACAATCTTC TAAACAACCT TTTAGTCAGA TTCCACAACT AGTAGCACAG CCAGGTCCTT CTTCTGTGAA TCCTGCTCCT AGATCCCAAG TTAAAGGCGA AACAGCTCCA TTCCAACGCC AGCAAGGGGT TCCAGCTTCC ACCAACATAG GTTACAGTAG TCAGACTTCA GTTCCGAATA ATGCTATCCA GCCATCTCAA GTACCCCACC CAGCATTAAC AAATTCTGTG ATGCAGCAAG GTGGGCAAAC GGTATCATTA AATTATGGCA AAAGAATAAA CGAGGGTCCT CCTCATCAAT CAATGAACAG ACCATCAAAG ATGATGAAAG TGGATGATAG GAGAACCACT TCACACCCCG GAGGCCATGC GTCTAATTCA ATGCTTCCGA ATCAAGTACA AGCTCCCCAG ACACGTATCT CCCCCGATGT CCAGTCAACA TTGCTCCAGC AAGTAATGAA CCTTACGCCA GAACAGCTGA GATTGCTGAC TCCAGAGCAA CAGCAAGAGG TCTTAAAGCT GCAACAAGCG CTCAAGCAAG ACCACATGAT GCAGCTTTCA TAG 
Length1383
Protein Sequence
Protein Residue
Map Locationscaffold_2: 14158922.. 14161659
Download Sequence
A.thaliana
AGI-codeAT1G71800.1
Descriptioncleavage stimulating factor 64
TAIR curator summaryRNA 3′-end–processing factor of antisense FLC transcript. Mediates silencing of the floral repressor gene FLC.
Alias[CSTF64][cleavage stimulating factor 64]
Gene coexpression
MR
MR Locus Description
3.4641 Ahg496103 VIRE2 interacting protein 2
6 Ahg493953 HD domain-containing metal-dependent phosphohydrolase family protein
9.48683 Ahg922803 Ribosomal protein S7p/S5e family protein
11.5758 Ahg495780 CwfJ-like family protein / zinc finger (CCCH-type) family protein
19.4422 Ahg496587 chromatin remodeling 24
22.9129 Ahg495855 Calmodulin-binding protein
22.9783 Ahg945443 elongation factor P (EF-P) family protein
23.3666 Ahg910852 WAPL (Wings apart-like protein regulation of heterochromatin) protein
23.6643 Ahg497034 kinesin-like calmodulin-binding protein (ZWICHEL)
36.5377 Ahg334537 zinc ion binding
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression