| Annotation |
|---|
| Description | jgi|Araly1|911328|Al_scaffold_0001_1582 |
| Sequence |
ATGAGCACCC AGAAGCAGGG GGTGACTGTT CGGGACCTGG TAGAGGAAGC CAAGAAACGA ATTGTAATCC TTGTGATATG CGTCGTCGGA CTGTCCTACC TCATGTCCCT GACAAGTTCA TCGGTTTGGG TAAACCTCCC TGCTGCTGCG TGTTTGATCA TCTTCCTTCG TTATTTCTCA TTCGATATTG AAATGAAAAG AAAAGCTGCA GCTTACAACA GCAAACCTTC GTCTCTGAAT GCACCAACTC TAAATCAAAT ACCCGAACTC CCGAAAGCAG CTCCACGTTC TGACTGGAGA AGTAAAGTGA ACTCTCAAGT TGTTGAGGAT GCAATTGATC ACTTCACCCG TCACCTCATT TCTGAATGGG TACTGGATCT TTGGTACTCC CGCATTACAC CGGATAAGCA AGGTCCTGAA GAGTTGGTGT TTATTATCAA CCATGTTCTT GGGGAACTTT CACGGCGGTT TAGAAACGTA AATCTTATTG ATCTATTGAC AAGGGATCTA ATTGATATTA TATGCCGTCG TGTGGAGCTT TTCCGCGAGT GTCAAGCAAA GATTGAGAGA CAACAAAGGA GAAACCTCAG TTTTGAAGAC CGAGACTCAG AACTAAGACG TGTGATGGCC GCTGAAGATA AATTGCACCC TGCGTTGTTC TCTCCTGAAT CCGAGCATAA GGTTCTGCAA CATATAATGA ACAGCCTCAT TTTACTAACA TTTAGGCCAG AGGATCTGCA CTGTGCTTTT TTCCACTATA CCGTGAGGGA GCTTCTTGCT TGCTGTGTGA TCCGACCAGT CCTAAACCTA GCCAATCCTC GGTTCATAAA TGAGAGGATT GAAGCTGCTG TAATGTCAAA GATAAAGACT AGTAACAGAT CTAGTGCTGC AGAAGAGGCT TCTCAGTCTG AAGATCTCTC AAATGTTTCT CCTGATCATT TTTCTAGATA TCTGGACCCC TCTGTCACAG GTGTTGAGCT TGTGCAATTG AAAAATGAAC AGCAGAAAAA TTCTAAAAGA AAAAGCGCTA CAGATAAACA GCATGTACCA GATTTCTCTA AAGATCCATT GCTTTCTATG GACACTCGAT CTTCCCGATC GTGGAACTCC TTCCCCTCGA CTTCCAAAAT AGGTGATGGT AGTAAAGATC CTCAAGGACA TCGAGGAGGA GAGGGATGGG GTGACGTATT AGACATGATG TCACAAAGGA AAACTGAGAC CCTTGCTCCT GAGCATCTTG AAAGTGTGTG GGCAAAAGGA AGAAACTATA AAATGAAGGA CGGTGAGAAA GTTGAGGAGC GCGTGCCCCC GAGATGGTCT AGCAAGGATA GTGACTTCAA TGAAAACACT GTGAATGCAA GAGAGTCCAG TCAGCGTAAA GTCGTAATTA CAGACAGTCA CTTATCAAGT TATTCCTCTG CTGAAGAGGA CGAGGAGCAA ACAAAGAGTA GTCATTCTTA TACATCGGAG GATGAGGAAA CGGTAACAGG TCTAAACAGT CCTGGGACTC GAGTCTGGGA TGGTCGAACG AAGAAAAATC TTGGTGTTTC ACGGATACAC CATCCACTTG AAAATTCAGG CCGTTTTTTC AAAAAGACCA GTAAAGGGCA TGAACGTTAT CAGCAAGTAC CTGGACATCA ATCTGGCAGG AAGAGATCCA GAATTTCTGG TCATACTATA GGCGATGATG ATAGCGATGA TTCTGAAGAT GGTTCTTTGA CTAGATCATA CAGCGGAATG TCTGCAACGT CATCTGCATC ATATGTTTCA GTGGCAGAAA GTGAACTTCC CAATGCCCCT AGAAGTTCTT TGTTGGTTGA TTCCTTTGCG AAGTTGAGAT GTGAGGTTCT GGGTGCCAAT ATTGTGAAGG GTAGTTCTAA GATGTTTGCT GTGTATTCAG TTGCAGTCAC AGATGAAAAT AATCATAGCT GGTCTATCAA AAGAAGATTT CGACATTTTG AAGAGCTTCA CCGACGGCTT AAAGTGTTTC CTGAGTACAA TCTTCATTTA CCGCCGAAGC ATTTCCTATC AACAGGCGTG GATATACCTG TTATCCAAGA GAGATGTGTA CTACTTGACG AGTATATCAA GCTACAACGA ATTTCAGGCT CAATTGAAGT TTGGGACTTC CTCAGTGTGG ATTCCCAGAC TTATGCTTTC TCAAGTTCTT TCTCAATCAT TGAGACGCTA ACAGTTAAAC CTGTCAGTAA GCCATCCACT GTCACTACAA ATATGGCAAA TATGACCGAG GCAATGCCAG GTCCTCTTCC TTGGAGAGAA AATCTAAGTT CAGAGAATGG GAAATCGGGT CAAAATATGA GGAATAACGT TATGGTGGAT GATGTGAAGT CAAAAGTGAA AACTCTTGGA AATGATCATA TGAAGACGCC TGATTTAGAT GTGAGAAACC GCAAAGAAAA TGGCGGGCTA AAAGTGGGAC CTGGACATGC CGATGATGTG GCCTGCGCTG GCCTGCCCAC CGAGTGGGTT CCTCCAAAGC TAACTTTACC CTTGCTAGAC TTAGTAGATG TTGTCTTTCA ACTCCAGGAG GGTGGATGGA TCAGGCGGAA AGCTTTCTGG GTTGCCAAAC AGATACTTCA ACTTGGGATG GGCGACGCAT TGGACGATTG GGTACTTGAG AAAATCCGTC TTCTGCGGCG GGGAACTGTA GTTGCATCTG GAATTCAACG GGTTGAACAA ATACTATGGC CGGATGGTGT ATTCATGACA AAACATCCAA AAAGGCAGCA ACAATCCAGC ATTTCTGAAG AAGAGCAGCG ACAAGAAGCA GAGAGACGAG CAAGATTTGT TCATGAGCTG ATGATGGGTA ATGAGCGTCC TGTTCTCTGA |
| Length | 2850 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 6151809.. 6156241 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G15240.2 |
| Description | Phox-associated domain;Phox-like;Sorting nexin, C-terminal |
| TAIR curator summary | |
| Alias | |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 12.7671 |
Ahg479993 | Protein of unknown function (DUF1644) |
| 14.2127 |
Ahg313324 | Mediator complex, subunit Med10 |
| 18 |
Ahg939036 | squamosa promoter-binding protein-like 12 |
| 22.9783 |
Ahg481510 | Xanthine/uracil permease family protein |
| 24.3721 |
Ahg349878 | sorting nexin 1 |
| 36.7015 |
Ahg471053 | phytochrome A |
| 38.7427 |
Ahg470299 | RAD3-like DNA-binding helicase protein |
| 39.4208 |
Ahg486610 | Protein of unknown function (DUF3245) |
| 43.3013 |
Ahg491024 | phosphotransferases, alcohol group as acceptor;binding;inositol or phosphatidylinositol kinases |
| 44.1135 |
Ahg479495 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|